Gene Information

Name : SE451236_08750 (SE451236_08750)
Accession : YP_008264797.1
Strain : Salmonella enterica 08-1736
Genome accession: NC_021820
Putative virulence/resistance : Virulence
Product : fimbrial chaperone protein FimC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1893733 - 1894446 bp
Length : 714 bp
Strand : +
Note : involved in type 1 fimbriae biosynthesis, interacts with FimH; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGCAAAAGGTATTTTTTACCATGCTGAATAGTATAAAAGTAGGCTTTATTGTTCTTCTCACGTTATTTACTTCGCTGAA
CGTACAGGCGGCGGGGGGGATTGCATTAGGCGCCACGCGCGTTATTTATCCCTCGGCGGCGAAGCAGACTTCTCTGGCAA
TCAGTAATAGCGATACTCAAGAACGTTACCTCGTCAATTCATGGATCGAAAATAACGCTGGGCAGAAAGAAAAAACGTTT
ATCGTTACGCCGCCTTTATTCGTCAGCGAGCCCAAAAGTGAAAACACGCTGCGTATTATCTACGCCGGGCAACCGCTACC
CGGGGATCGGGAGTCGTTATTCTGGATGAACGTGAAAGCCATCCCGTCGGTCGATAAAAGTCATATTGAAGGAAAAAACG
TTCTGCAACTGGCGATTCTGTCGCGCATCAAACTGTTCGTGCGTCCGGCGAATTTGCCGCAGACGCCGGAAGACGCGCCG
ACCTTGCTGAAATTTTCCCGTGTCGGCAACCATCTCAAGATAACCAACCCATCTGCTTATTACCTCACGCTGGTCAATAT
CAGCGTGGGCGCGAAAAAGATTGATAACGTGATGATCGCGCCAAAAAGCGACATGCAAATTCCCTTACCGACTGGCGCGC
AGGGCAACGTGACATTTCAGTCCGTCAATGATTACGGCGCATTGACGTCGGCGACAACGGCCAGTCTCGGTTAA

Protein sequence :
MQKVFFTMLNSIKVGFIVLLTLFTSLNVQAAGGIALGATRVIYPSAAKQTSLAISNSDTQERYLVNSWIENNAGQKEKTF
IVTPPLFVSEPKSENTLRIIYAGQPLPGDRESLFWMNVKAIPSVDKSHIEGKNVLQLAILSRIKLFVRPANLPQTPEDAP
TLLKFSRVGNHLKITNPSAYYLTLVNISVGAKKIDNVMIAPKSDMQIPLPTGAQGNVTFQSVNDYGALTSATTASLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 9e-52 50
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 5e-48 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SE451236_08750 YP_008264797.1 fimbrial chaperone protein FimC VFG0445 Protein 4e-104 100
SE451236_08750 YP_008264797.1 fimbrial chaperone protein FimC VFG0911 Protein 2e-48 50
SE451236_08750 YP_008264797.1 fimbrial chaperone protein FimC VFG1644 Protein 3e-48 50
SE451236_08750 YP_008264797.1 fimbrial chaperone protein FimC VFG0875 Protein 4e-53 47
SE451236_08750 YP_008264797.1 fimbrial chaperone protein FimC VFG0455 Protein 2e-40 42