Gene Information

Name : SE451236_07410 (SE451236_07410)
Accession : YP_008264531.1
Strain : Salmonella enterica 08-1736
Genome accession: NC_021820
Putative virulence/resistance : Virulence
Product : Hcp1 family type VI secretion system effector
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1607098 - 1607583 bp
Length : 486 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :

ATGTCTTATGACATTTTTCTGAAAATTGACGGCATTGACGGCGAGTCAATGGATGACAAACACAAAAATGAAATTGAAGT
ACTGAGCTGGCGCTGGAATATTCATCAGGAATCCACCATGCACGCCGGTAGCGGTCTCGGTTCCGGTAAGGTCTCCGTCA
CTAATCTTTCATTTGAACATTACATCGATCGCGCCAGCCCGAACCTGTTCAAATACTGCTCTTCCGGTAAGCACATTCCG
CAGGCCATTCTGGTTATGCGTAAGGCTGGCGGCAATCCGCTGGAGTACCTCAAGTACACTTTCACAGATCTGATTATTGC
AATGGTATCGCCCAGCGGAAGCCAGGGAGGGGAAATTGCGTCTCGCGAATCAATTGAACTCTCCTTCAGCACCGTGAAGC
AGGAATACGTGGTGCAGAACCAGCAGGGTGGCAGCGGCGGCACCATCACCGCAGGCTACGACTTCAAGGCCAACAAAGAA
ATTTAA

Protein sequence :

MSYDIFLKIDGIDGESMDDKHKNEIEVLSWRWNIHQESTMHAGSGLGSGKVSVTNLSFEHYIDRASPNLFKYCSSGKHIP
QAILVMRKAGGNPLEYLKYTFTDLIIAMVSPSGSQGGEIASRESIELSFSTVKQEYVVQNQQGGSGGTITAGYDFKANKE
I

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
STY0302	NP_454882.1	conserved hypothetical protein	Not tested	SPI-6	Protein	3e-70	94

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
SE451236_07410	YP_008264531.1	Hcp1 family type VI secretion system effector	VFG2071	Protein	9e-24	45