Gene Information

Name : CFSAN002050_01165 (CFSAN002050_01165)
Accession : YP_008263028.1
Strain :
Genome accession: NC_021819
Putative virulence/resistance : Unknown
Product : transposase IS401
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 55162 - 56049 bp
Length : 888 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGCCACTTATGCAGCGTCTGAGTGGTACACACGGGGTCGGGCCGGTATGTCGCGAACTGGATATTGCCCCGTCGACATA
TTACTGGCATCAGCAACGCCAGCTACATCCTGAGAAATGTAGCCAACGAGAAAAGTGCGATGCTCAAATCATCCAGGAGA
TAAAACGCGTTTACGGAGAAAATTACAGTGTCTATGGGGCACGAAAAGTCTGGCGTCAGTTGCTCCGCGAGGGCTTTAGC
GTCGCCCGGTGTACTGTTGAACGCCTGATGAAAATAATAGGTCTTCGGGGCGTACTCCGTGGCAAAGTCATCAAGACCAC
GATCGGTCGTAAAACAGCGGCAGCAGCGGATCTGGTAAACCGCCAGTTTGTGGCAGAACGTCCCAATCAGCTTTGGTGTG
CAGATTTTACGTACGTTAGCACCTGGCATGGCTTCGCCTATGTGGCGTTCATCATCGATGTGTTCGCAGGCACGATCGTT
GGCTGGCGGGTCTCATCGTCGATGGAAGCAAGGTTCGTGCTGGATGCTCTGGAACAAGCTCTGTGGGCACGTCGCCCCTC
AGGTACAATCCATCACTCGGACAAGGGCTCCCAATACGTGTCACTGGCGTACACCCAGCGGCTGCAGGAGGCGGAGCTGT
TGGCGTCGACAGGCAGTACAGGCGACTCTTACGATAATGCCCTGGCCGAGAGTATCAATGGCCTTTACAAAGCGGAAGTG
ATCCACCGTAAAAGCTGGAAAAACCACACGGAAGTGGAGCTTGCGACACTGGCGTGGGTGGATTGGTTCAACAATCGAAG
GTTACTGGAACGGCTAGGACACATACCGCCGGTAGAAGCCGAAAAAGCTTATTATGCTACCAGTACAAATAATGATCTGG
CAGCCTGA

Protein sequence :
MPLMQRLSGTHGVGPVCRELDIAPSTYYWHQQRQLHPEKCSQREKCDAQIIQEIKRVYGENYSVYGARKVWRQLLREGFS
VARCTVERLMKIIGLRGVLRGKVIKTTIGRKTAAAADLVNRQFVAERPNQLWCADFTYVSTWHGFAYVAFIIDVFAGTIV
GWRVSSSMEARFVLDALEQALWARRPSGTIHHSDKGSQYVSLAYTQRLQEAELLASTGSTGDSYDNALAESINGLYKAEV
IHRKSWKNHTEVELATLAWVDWFNNRRLLERLGHIPPVEAEKAYYATSTNNDLAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 2e-82 84
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 6e-83 84
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 5e-94 83
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 2e-103 78
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 5e-106 78
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 6e-106 78
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 6e-106 78
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 7e-106 78
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 5e-103 77
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 5e-103 77
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 6e-105 77
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 8e-105 77
Z1198 NP_286733.1 transposase Not tested TAI Protein 4e-105 77
Z1638 NP_287141.1 transposase Not tested TAI Protein 4e-105 77
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 1e-105 77
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 5e-103 77
Z1221 NP_286756.1 transposase Not tested TAI Protein 1e-105 77
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 1e-105 77
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 2e-102 76
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 3e-101 75
c5167 NP_757015.1 transposase IS629 Not tested PAI II CFT073 Protein 7e-74 75
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 4e-50 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002050_01165 YP_008263028.1 transposase IS401 VFG1602 Protein 2e-101 75