Gene Information

Name : CFSAN002050_01065 (CFSAN002050_01065)
Accession : YP_008263008.1
Strain :
Genome accession: NC_021819
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 33220 - 33885 bp
Length : 666 bp
Strand : +
Note : response regulator in two-component regulatory system with BasS; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGCGGGTTCTTTTGGTGGAGGATACGGCGGGATTGGGCGAGGCGGTCCGGGATCAGATTGCGGACGACGGCCACGCCGT
GGACTGGGTGCAAACTCTGCGCTTTGCTGAGGCGAGTATCAGGACCACAGCCTACGACCTGATTCTGCTGGACCTGATGC
TGCCCGACGGCCATGGCTTCGGCTTTTTGCGAACGATCCGGGCTACCGGAATAACAACACCGGTGATCATTCTGACCGCC
AGGGATCAGGTGTCTGACCGGATTGAAGGATTGAATGCCGGTGCTGACGACTACCTGGTCAAACCCTTTGATCTTTCGGA
GTTGTCGGCCCGCGTGGCCGCGGCGGCTCGCCGATATCGCGGCAATCCAAGCCCGATCATACAAGTGGGCGAGCTGATGA
TTGATCTTGGCGATCACCGCATCAGTCGCAACGGCCTGCCGGTAGAACTTACGGCACGGGAGTGGGCATTGTTTGAGGGC
TTTATCCAGCGACCCGGAATGCTGTTATCGCGATCGCAACTGGAGGATCGTCTATACGCTTTCGGGGCCGAAATCGAAAG
TAACACCATCGAAGTTTATGTCAGCCGTCTGCGTAAAAAGCTGGGGCGGGACGCTATCGTAACCGTCAGGGGAATGGGCT
ATCGCCTGGAAACACATGACCACTAG

Protein sequence : 
MRVLLVEDTAGLGEAVRDQIADDGHAVDWVQTLRFAEASIRTTAYDLILLDLMLPDGHGFGFLRTIRATGITTPVIILTA
RDQVSDRIEGLNAGADDYLVKPFDLSELSARVAAAARRYRGNPSPIIQVGELMIDLGDHRISRNGLPVELTAREWALFEG
FIQRPGMLLSRSQLEDRLYAFGAEIESNTIEVYVSRLRKKLGRDAIVTVRGMGYRLETHDH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002050_01065 YP_008263008.1 transcriptional regulator BAC0083 Protein 6e-29 42
CFSAN002050_01065 YP_008263008.1 transcriptional regulator BAC0487 Protein 1e-30 41
CFSAN002050_01065 YP_008263008.1 transcriptional regulator NC_008702.1.4607594. Protein 4e-16 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002050_01065 YP_008263008.1 transcriptional regulator VFG0473 Protein 1e-31 43