Gene Information

Name : CFSAN002050_00995 (CFSAN002050_00995)
Accession : YP_008262994.1
Strain :
Genome accession: NC_021819
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 19724 - 20392 bp
Length : 669 bp
Strand : -
Note : response regulator in two-component regulatory system with QseC; regulates FlhCD which is the master regulator for flagella and motility genes; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGAGAATTTTACTGGTTGAAGATGATCTGATGATCGGCGACGTGGTGGCGAATTCGTTACGCGATGCGTCGTATGCGGT
GGACTGGATGAAAAATGGCAATGATGCGCTGGCCAGTTGCTTCGCGCAGCATTATGACATTGTGCTCCTGGATCTTGGGC
TGCCGGGACAGGACGGCTTTAGCGTCATGAACGCACTTCGCCGTCAGGGATCATCCGTACCGGTGGTGATTGTCACCGCG
CGGGATGCCCTTACGGACAGACTTCACGGCCTCGACAGTGGAGCAGACGATTACCTAATTAAACCGTTCGAGTTCAGCGA
ACTGCTCGCGCGGATACGCGCTGTTTTGCGACGACATAACGGCAACAGTGATCGATTGCTGAGTAACGGTGTGCTCAGCC
TGAACCCGGTCAGTCACGAAGTGTGTTTGTTGGCCAGCGGAGAGAACTTTTTACTTTCGAAGCGCGAGTATGCTCTTCTG
GAAGCACTCATGCAGCGCCCCGGCGGTATTCTCTCTCGCAGCGATCTTGAAGACCGTATTTATGGCTGGGGGGATGAGAT
TGAAAGTAACGCTGTTGAGTATTTCATCCACGCTCTACGTAAAAAGCTCGGCCGGAATGCCATCAAAAATGTCAGGGGGG
TCGGATGGCTGGTTTCCAAAAGCGAGTGA

Protein sequence :
MRILLVEDDLMIGDVVANSLRDASYAVDWMKNGNDALASCFAQHYDIVLLDLGLPGQDGFSVMNALRRQGSSVPVVIVTA
RDALTDRLHGLDSGADDYLIKPFEFSELLARIRAVLRRHNGNSDRLLSNGVLSLNPVSHEVCLLASGENFLLSKREYALL
EALMQRPGGILSRSDLEDRIYGWGDEIESNAVEYFIHALRKKLGRNAIKNVRGVGWLVSKSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-33 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002050_00995 YP_008262994.1 transcriptional regulator VFG0473 Protein 1e-37 42