Gene Information

Name : CFSAN002050_05975 (CFSAN002050_05975)
Accession : YP_008259141.1
Strain : Salmonella enterica CFSAN002050
Genome accession: NC_021818
Putative virulence/resistance : Virulence
Product : restriction methylase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 899200 - 900033 bp
Length : 834 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGCAAACAGAAGCTGAAGTGTTAACTAACCATAACGAACTTATCTGCTCGACAAATATTGAACGGATCGTCACCGGGCG
GAATGCTGCGCTGCAACAGATTGAAGCCGTCATCCACCAGCTTAATGAGATTTCCCGCCTGACATCCAGTATTGGCGGCA
ACACGGCGGAGCACTGGGCGATGCGGCAAGGGCGGGCTTTTGACTGCTGGTTGATGCAGTCGGTGGATAAATCCTTGCCG
GTAATCGCCCGCAATATCGATCGCGGTATCTGGCGTGACCTGATGCTGAAATCGGGGATGCTGACTCTGATAGACGCTGA
AGCCCGCAGCCAGTGGGCAAAGGATCTGGAGGAGGGCGATCTTCCGGTCATCAGTGAAGCCAATATCCTGAGTACCTTTG
AGCAGTTGCACCACAATAAGCAGGACGTTTTTGAACGCGGCATTATCAATGTGTTCAAAGGACTAAGCTGGGACTATAAA
ACCAATAATCCCTGCTACTTCGGTAAGCGGATTATCGTTAATAGCCTGGTGAAGTACGACAAATGGGGTTTCAGCCCGAA
CTGGGGCTGGCGGCGTGACCAGCTCGCCGATCTGGAGAGGATGCTGTACCTGCTTGACGGGAAGACTATTCCCGATAACC
GGCATGATGTCTCCATCCGGTTTATGGACTTCGTGCGTGGCAATCCGCATCAGCAGGTTTTCGAAGACGAACTTTTCATT
ATTCGTTACTTTCAGAAGGGGAGCGGGCACATTACGTTCAAACGGTTGGATCTGGTAGAGAAGATGAATGATATCGTGGC
AAAACACTATCCAGGGATGTTAGCCGCAAAATGA

Protein sequence :
MQTEAEVLTNHNELICSTNIERIVTGRNAALQQIEAVIHQLNEISRLTSSIGGNTAEHWAMRQGRAFDCWLMQSVDKSLP
VIARNIDRGIWRDLMLKSGMLTLIDAEARSQWAKDLEEGDLPVISEANILSTFEQLHHNKQDVFERGIINVFKGLSWDYK
TNNPCYFGKRIIVNSLVKYDKWGFSPNWGWRRDQLADLERMLYLLDGKTIPDNRHDVSIRFMDFVRGNPHQQVFEDELFI
IRYFQKGSGHITFKRLDLVEKMNDIVAKHYPGMLAAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL57572.1 unknown Not tested LEE Protein 1e-76 57
ORF_49 AAZ04463.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-77 57
z1226 CAD33792.1 Z1226 protein Not tested PAI I 536 Protein 6e-78 57
APECO1_3484 YP_854327.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-77 57
unnamed CAI43906.1 hypothetical protein Not tested LEE Protein 1e-76 57
aec79 AAW51762.1 Aec79 Not tested AGI-3 Protein 4e-78 56
Z1226 NP_286760.1 hypothetical protein Not tested TAI Protein 1e-77 56
unnamed CAE85207.1 hypothetical protein Not tested PAI V 536 Protein 2e-78 56
Z1664 NP_287166.1 hypothetical protein Not tested TAI Protein 1e-77 56
S3207 NP_838489.1 hypothetical protein Not tested SHI-1 Protein 1e-76 55
SF3002 NP_708776.1 hypothetical protein Not tested SHI-1 Protein 1e-76 55
unnamed AAK00485.1 unknown Not tested SHI-1 Protein 1e-76 55
ECO103_3595 YP_003223452.1 hypothetical protein Not tested LEE Protein 9e-77 55
ECO111_3781 YP_003236116.1 hypothetical protein Not tested LEE Protein 3e-77 55
unnamed CAD66210.1 hypothetical protein Not tested PAI III 536 Protein 6e-68 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002050_05975 YP_008259141.1 restriction methylase VFG1533 Protein 3e-78 57
CFSAN002050_05975 YP_008259141.1 restriction methylase VFG0666 Protein 6e-77 55
CFSAN002050_05975 YP_008259141.1 restriction methylase VFG1685 Protein 3e-68 53