Gene Information

Name : CFSAN002050_05970 (CFSAN002050_05970)
Accession : YP_008259140.1
Strain : Salmonella enterica CFSAN002050
Genome accession: NC_021818
Putative virulence/resistance : Virulence
Product : toxin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 898740 - 899084 bp
Length : 345 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGCAAAACGTTTTATCACTGTCTTCACCGGCAGCGACCCCGTCACGCTTGTCGCCCGTCGAAGCCTGGCGAAAACTGCT
GTCGTATTTACTGCAACGCCACTACGGCCTGGAACTCAACGACACGCCATTCTGCGACGATAGTGTTATTCAGGAACATA
TCAACGCAGGCGTTACGCTTGCCGATGCCGTGAACTTTCTGGTGGAAAAGTACGAACTTGTTCGTATCGATCGCAAGGGA
TTTAGCTGGCAGGAACAATCACCCTATCTTCGGGCTGTAGACATTCTGCGGGCGCGACAGGCTACGGGTCTGTTGCGACG
TCAACGCTATCTCGCGGCACACTGA

Protein sequence :
MQNVLSLSSPAATPSRLSPVEAWRKLLSYLLQRHYGLELNDTPFCDDSVIQEHINAGVTLADAVNFLVEKYELVRIDRKG
FSWQEQSPYLRAVDILRARQATGLLRRQRYLAAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66207.1 hypothetical protein Not tested PAI III 536 Protein 9e-25 62
unnamed CAI43848.1 hypothetical protein Not tested LEE Protein 1e-23 62
aec76 AAW51759.1 Aec76 Not tested AGI-3 Protein 1e-23 62
z5091 CAD33789.1 Z5091 protein Not tested PAI I 536 Protein 1e-23 61
unnamed AAL08478.1 unknown Not tested SRL Protein 3e-23 61
yeeV CAE85204.1 YeeV protein Not tested PAI V 536 Protein 5e-24 61
ECO103_3592 YP_003223449.1 hypothetical protein Not tested LEE Protein 3e-24 61
yeeV YP_854325.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-24 61
yeeV ADD91699.1 YeeV Not tested PAI-I AL862 Protein 5e-23 61
unnamed AAL67342.1 intergenic-region protein Not tested PAI II CFT073 Protein 9e-24 61
unnamed AAL67389.1 L0007-like protein Not tested PAI II CFT073 Protein 4e-23 61
c5149 NP_756997.1 hypothetical protein Not tested PAI II CFT073 Protein 5e-23 61
unnamed CAD42101.1 hypothetical protein Not tested PAI II 536 Protein 6e-24 61
unnamed AAL57575.1 unknown Not tested LEE Protein 2e-23 61
ECs4539 NP_312566.1 hypothetical protein Not tested LEE Protein 2e-23 60
unnamed AAC31486.1 L0007 Not tested LEE Protein 2e-23 60
unnamed ACU09433.1 conserved hypothetical protein Not tested LEE Protein 2e-23 60
Z5091 NP_290242.1 hypothetical protein Not tested LEE Protein 2e-23 60
unnamed AAK00482.1 unknown Not tested SHI-1 Protein 2e-24 60
yeeV NP_838487.1 hypothetical protein Not tested SHI-1 Protein 3e-24 60
yeeV NP_708773.1 hypothetical protein Not tested SHI-1 Protein 3e-24 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002050_05970 YP_008259140.1 toxin VFG1682 Protein 4e-25 62
CFSAN002050_05970 YP_008259140.1 toxin VFG1069 Protein 1e-23 61
CFSAN002050_05970 YP_008259140.1 toxin VFG1530 Protein 5e-24 61
CFSAN002050_05970 YP_008259140.1 toxin VFG1620 Protein 2e-24 61
CFSAN002050_05970 YP_008259140.1 toxin VFG0786 Protein 7e-24 60
CFSAN002050_05970 YP_008259140.1 toxin VFG0663 Protein 7e-25 60