Gene Information

Name : CFSAN002050_05965 (CFSAN002050_05965)
Accession : YP_008259139.1
Strain : Salmonella enterica CFSAN002050
Genome accession: NC_021818
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 898396 - 898725 bp
Length : 330 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGCCCCAAAACCAACCCTCCGTGCCTGTCTGGGGCCTGCGGAGCGATATCACGCCCTCGTTTGGCGCGCGGTTAGTGCA
GGAAGGCTGTCGCCTGCACTTTCTGGCTGACCGCGCCAGCCTTTGCGGTAATTTCACGCCGGAGCAACTGCAAACACTGG
AGGTCACCTTTCCGCAGTTCGTGAAACAACTGGAATCGGTGCTAAAAAGCGGGGCGCTCGATCCGCGCCAGCCGCACCGC
CACAGCATCACCCTCAATGGCCTGACCTGCGAGGCCGACACCAACGGTAGCCACGGCTACGTTTACCTCACTATCTACCC
AGCCGAATAA

Protein sequence :
MPQNQPSVPVWGLRSDITPSFGARLVQEGCRLHFLADRASLCGNFTPEQLQTLEVTFPQFVKQLESVLKSGALDPRQPHR
HSITLNGLTCEADTNGSHGYVYLTIYPAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yeeU YP_854324.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-23 54
yeeU AAZ04460.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-23 54
yeeU ADD91700.1 YeeU Not tested PAI-I AL862 Protein 1e-22 53
aec75 AAW51758.1 Aec75 Not tested AGI-3 Protein 3e-23 53
Z1220 NP_286755.1 structural protein Not tested TAI Protein 9e-23 53
Z1658 NP_287161.1 structural protein Not tested TAI Protein 9e-23 53
yeeU NP_838486.1 structural protein Not tested SHI-1 Protein 4e-23 53
yeeU NP_708772.1 structural protein Not tested SHI-1 Protein 4e-23 53
unnamed AAK00481.1 unknown Not tested SHI-1 Protein 3e-23 53
c5150 NP_756998.1 hypothetical protein Not tested PAI II CFT073 Protein 4e-22 53
unnamed CAD66206.1 hypothetical protein Not tested PAI III 536 Protein 1e-23 52
yeeU CAD42100.1 hypothetical protein Not tested PAI II 536 Protein 9e-23 52
ECO103_3591 YP_003223448.1 hypothetical protein Not tested LEE Protein 9e-23 52
yeeU YP_853121.1 antitoxin of the YeeV-YeeU toxin-antitoxin system Virulence PAI IV APEC-O1 Protein 9e-23 51
unnamed AAL08477.1 unknown Not tested SRL Protein 2e-21 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002050_05965 YP_008259139.1 hypothetical protein VFG0662 Protein 1e-23 53
CFSAN002050_05965 YP_008259139.1 hypothetical protein VFG1681 Protein 6e-24 52
CFSAN002050_05965 YP_008259139.1 hypothetical protein VFG1619 Protein 4e-23 52
CFSAN002050_05965 YP_008259139.1 hypothetical protein VFG1068 Protein 8e-22 50