Gene Information

Name : CFSAN002050_05935 (CFSAN002050_05935)
Accession : YP_008259133.1
Strain : Salmonella enterica CFSAN002050
Genome accession: NC_021818
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 892136 - 892822 bp
Length : 687 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGACACGGACAGAGCGCCGCCACGACAGGCTGGCGATCAGGTTGTCACTGATTATCAGCCGTCTTGTCACGGGTGAAAC
GTTAGATATGCACAAGCTGGCCGCTGAGTTTGGTGTCTCGACACGGACTCTGTACCGGGATTTTCATGAACGGCTGATGT
ATCTGGATCTTGAATGTCACAACGGTTGCTACCGTCTGCGAAACAGTGGTGGTGGCCCGCAGGCCGAACTGGATGTCCTG
ACCTTTATCCACCGTGCCGGTATGTCTGGTTTATTTCCGGGCCTTAACCGCCGCCTGGTCAGTTTGTTTCTGGCCTGTGA
TGATGTTCCCTGCCTTGTCGGAGAGACTCTCACGGATCTTGGTACCTCCGCGCCACTCTCTTTTTATCACCTGGTTAAAG
CCATCACGACCTGTCAGCGCGTGACGCTGCTGGCAGAGGGGCAGCGTTGTGAACACCTTGCGCCTTATCGCCTGGTTGCC
AGGGAGAATGACTGGTATCTGATCGCTGAACATCACGGGCGGCCCGTGGTTTTTGTTCTGCGTGAAATCCATGTGGTTCA
GCTTACCGGGGAGGTATTCAGGCGCAACGAACGGCTTTACCGAATGGCGGAAAACACAGGATTCATCCAGGCGCTGCCGC
ATTTTCGCTGCATTCAGCAGTCGTTGGATGCGCTTTCTTCACCATAA

Protein sequence : 
MTRTERRHDRLAIRLSLIISRLVTGETLDMHKLAAEFGVSTRTLYRDFHERLMYLDLECHNGCYRLRNSGGGPQAELDVL
TFIHRAGMSGLFPGLNRRLVSLFLACDDVPCLVGETLTDLGTSAPLSFYHLVKAITTCQRVTLLAEGQRCEHLAPYRLVA
RENDWYLIAEHHGRPVVFVLREIHVVQLTGEVFRRNERLYRMAENTGFIQALPHFRCIQQSLDALSSP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_3492 YP_854319.1 transcriptional regulator Not tested PAI I APEC-O1 Protein 2e-30 42
c5160 NP_757008.1 transcriptional regulator YfjR Not tested PAI II CFT073 Protein 2e-30 42
yfjR AAZ04453.1 transcriptional regulator Not tested PAI I APEC-O1 Protein 1e-30 42
unnamed CAD42094.1 hypothetical protein Not tested PAI II 536 Protein 2e-30 41
unnamed CAD33782.1 hypothetical protein Not tested PAI I 536 Protein 1e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002050_05935 YP_008259133.1 hypothetical protein VFG1613 Protein 1e-30 41
CFSAN002050_05935 YP_008259133.1 hypothetical protein VFG1523 Protein 6e-31 41