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Name : CFSAN002050_05875 (CFSAN002050_05875) Accession : YP_008259121.1 Strain : Salmonella enterica CFSAN002050 Genome accession: NC_021818 Putative virulence/resistance : Unknown Product : DEAD/DEAH box helicase Function : - COG functional category : - COG ID : - EC number : - Position : 880160 - 883291 bp Length : 3132 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGCTAAGCGAAGACGATTTGGAACAGCAATGCCTGCAATGGTTTGCTGAACAGGGCTGGGAAGTGCTGCACGGGCCGGA TATCGCGCCAGATGGTGATAACCCGCTGCGTGCCTCATTTCATGATGTGTTTCTGCGCCCGGTCATGCTGGAACAGCTAC AAACCATCAACCCACATATCCCTATTTCCGTGCTGGAAGAGGTGATACAGCGTATCGCCCATGCGCACAGCCCGGATCTG GTCGTCAGCAATAAAGCCTTTCATCACCTGTTGCTCAATGGCGTACCCGTTGAATATAAGCATGAAGACAAGGTGATTCA CGATAACGCGCTGTTAATGGATTTCAACCATCCAGACAACAACCGCTTTATGGTGGTGAACCAGGTCGCCATTCAGGGAA TAAAGCAGGTACGTCGCCCGGATGTCATTGGCTATATCAACGGTCTGCCAGTAGCGGTGATCGAACTAAAAAGCCCGGTT GATGCTAACGCCGATATCTGGGCGGCGTTTAACCAGTTACAGACCTATAAAAACGAACTCAGCGACCTGTTTATTTGCAA TGAAGCGCTGGTGGTGAGCGATGGGCAGAACGCGCGCGTTGGCTCTCTCACGGCGGATGAAGAGCGCTTCCTGCCGTGGA AAACCGTGGCGAACGAAAATGATAAACCACAGTTTGACTGGCAGCTTAAAACCGTGGTGCAGGGCTTCTTTAACCGTGCG CTTCTGCTCGATTACATTCGTTATTTTGTCCTGTTTGAGAACGACGGCAAACGGCTGATCAAGAAGATTGCCGCCTATCA CCAGTTCCACGCGGTGCGTGAAGCGGTTGCGGCTACGATTGTAGCGTCTACCGGTAAACATCTGCCGCTGCACAGCAATA TTCAGCCCGGCAGTAAAAAAGCGGGCGTCGTCTGGCATACCCAGGGTTCCGGCAAAAGTATCTCCATGTGCTGCTATGCC GGGAAACTGCTGCAACAGGCGGAGATGAACAACCCGACGATTGTGGTGGTGACGGATCGTAACGATCTCGACGGGCAATT ATACGCCACCTTCTGCCAGGCACAGGATTTACTGAAGCAGACGCCATTACAGGCCAATGATCGCGATGAATTGCGCGAGC TGCTCAATGCCCGTGAATCCGGCGGCATTATCTTTACCACCGTGCAGAAGTTTGCACCGCTGGACGGAGAGCAGAGCCAT CCGGCACTCAATCAGCGCAGTAATATCGTCGTGATTTCGGATGAAGCGCACCGTAGCCAGTATGGCCTGAGCGCCACGCT GGACAGACAAACTGGCGTCTATAAATACGGCTACGCCAAACATATGCGCGATGCGCTGCCGAATGCATCGTTTATGGGCT TTACCGGTACGCCGATTGCCTCGGAAGATAAAGATACCCGTGCCGTGTTCGGTGATTATGTCTCTATCTACGACATTCAG GATGCGGTGGATGATGGCGCAACGGTGCCTATCTACTATGAATCCCGGCTGGCAAAACTCGACCTGAACCATGAAGAGCT GGAAACGCTCTCCGACCAGGTGGATGAGCTGGTAGAAGACGAAGAAACAGGGCAGCAAGAAAAAACCAAAGGCGACTGGA GCCGCCTGGAAAAGCTGGTCGGTTCAGAGCCGCGTATTCAGCAGGTCGCCGCTGACCTGGTTCAGCATTTTGAAACGCGC AACACCGCCATGAACGGTAAAGCGATGATCGTCGCCATGAGCCGCGAGATCTGCGTGAAACTGTACGATGCTATCGTGGT GATACGCCCTGAATGGCACAGTGAAGACGTTGAACAAGGGGCGATCAAAGTCATCATGACCGGATCGGCGTCAGATAAAG ATCATCTGCAATCGCATATCTACAACAAACAGACCAAAAAACGCCTGGAAGCACGCTTTAAAGATCTGAACGATCCGCTG AAACTGGTGATTGTGCGGGATATGTGGCTGACAGGGTTTGATGCTCCATGCTGCCACACCATGTATATCGACAAACCGAT GCGCGGCCATAACCTGATGCAGGCGATTGCCCGCGTTAACCGCGTGTTCCGGGATAAACCCGGCGGGCTGGTGGTGGATT ATATCGGCATTGCCAACGAGCTGAAGCAGGCGCTGAAAACCTATACCGATTCAAAAGGCAAAGGACAGACGACGGTTGAT GCCAGGGAAGCCTTTGCTATTCTGCTGGAAAAAATGGATGTCATTCATGGGATGTTTGCCCGTTCGGCGGGCAAGCCGGG GTTTGATTACACGGGCTTCTCCCGCGATCCGCTGGCCTTCTTGCGTGATGCTGTGAACTACATTCTGGGGCTGGATGACG GTAAAAAACGTTACCTTGATGTCTCGCTGGCGATGAGCAAAGCCTGGTCACTATGTAACACGCTGGATGAGGCCGAACCT TTGCAGGAAGAGTTCGCGTTTCTTTCGGCGATCCGAGTGGGGCTTATCAAACTCGATCCGAAGGCCAAATTTAGCCAGTC AGAAAAAAATTCGCTGCTGAGTAAAATTCTTGATAATGCGGTCGTCGCGACCGGCGTTGAAGATGTGTTTGCTTTGGCCG GATTGGATAAGCCGAACATAGGTTTGCTGTCGGATGAGTTCCTGGAGGAAGTGCGGGAAATGCCGCAGCGTAATCTGGCT GTAGAATTGCTGGAAAAACTGCTCAATGACGGGATTCATGCACGTTCCGGTAATAACGTAGTGCAGCAGAAGAAATACTC TGACCGCCTGAAAGCCGTACTGCTCAAATACAATAACCGGGCGATTGAAACCGCACAGGTGATTGAAGAGCTGATTCAGA TGGCGAAAGCGTTTCAGGACGCAATGGCACGCGATGATGCGCTGGGACTTAACCCGGATGAAATCGCCTTCTACGATGCG TTGGCCGAAAACGAAAGCGCGGTGCGTGAACTTGGCGACGACACGCTCAGAAAGCTGGCGATTGAGGTCACGCGGCAACT GCGTAAATCCACCACCGTAGACTGGCAAGTGCGGGACAGTGTGCGGGCAAGATTACGGGTTCTGGTTCGCCAGACACTGC GTAAGTACAAATATCCGCCGGATAAAACAGCGGGCGCAGTAGAGTTAATATTAAAACAAGCGGAAGTTATTTCGAACCAC TGGACGATGTAA Protein sequence : MLSEDDLEQQCLQWFAEQGWEVLHGPDIAPDGDNPLRASFHDVFLRPVMLEQLQTINPHIPISVLEEVIQRIAHAHSPDL VVSNKAFHHLLLNGVPVEYKHEDKVIHDNALLMDFNHPDNNRFMVVNQVAIQGIKQVRRPDVIGYINGLPVAVIELKSPV DANADIWAAFNQLQTYKNELSDLFICNEALVVSDGQNARVGSLTADEERFLPWKTVANENDKPQFDWQLKTVVQGFFNRA LLLDYIRYFVLFENDGKRLIKKIAAYHQFHAVREAVAATIVASTGKHLPLHSNIQPGSKKAGVVWHTQGSGKSISMCCYA GKLLQQAEMNNPTIVVVTDRNDLDGQLYATFCQAQDLLKQTPLQANDRDELRELLNARESGGIIFTTVQKFAPLDGEQSH PALNQRSNIVVISDEAHRSQYGLSATLDRQTGVYKYGYAKHMRDALPNASFMGFTGTPIASEDKDTRAVFGDYVSIYDIQ DAVDDGATVPIYYESRLAKLDLNHEELETLSDQVDELVEDEETGQQEKTKGDWSRLEKLVGSEPRIQQVAADLVQHFETR NTAMNGKAMIVAMSREICVKLYDAIVVIRPEWHSEDVEQGAIKVIMTGSASDKDHLQSHIYNKQTKKRLEARFKDLNDPL KLVIVRDMWLTGFDAPCCHTMYIDKPMRGHNLMQAIARVNRVFRDKPGGLVVDYIGIANELKQALKTYTDSKGKGQTTVD AREAFAILLEKMDVIHGMFARSAGKPGFDYTGFSRDPLAFLRDAVNYILGLDDGKKRYLDVSLAMSKAWSLCNTLDEAEP LQEEFAFLSAIRVGLIKLDPKAKFSQSEKNSLLSKILDNAVVATGVEDVFALAGLDKPNIGLLSDEFLEEVREMPQRNLA VELLEKLLNDGIHARSGNNVVQQKKYSDRLKAVLLKYNNRAIETAQVIEELIQMAKAFQDAMARDDALGLNPDEIAFYDA LAENESAVRELGDDTLRKLAIEVTRQLRKSTTVDWQVRDSVRARLRVLVRQTLRKYKYPPDKTAGAVELILKQAEVISNH WTM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 85 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 46 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 46 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 46 |
