Gene Information

Name : CFSAN002050_04940 (CFSAN002050_04940)
Accession : YP_008258942.1
Strain : Salmonella enterica CFSAN002050
Genome accession: NC_021818
Putative virulence/resistance : Unknown
Product : type I restriction endonuclease subunit M
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 691058 - 692614 bp
Length : 1557 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGACAAGCCTTCAACAACGTGCAGAGCTTCATCGTCAAATCTGGCAAATTGCTAACGATGTCAGAGGTTCGGTCGATGG
ATGGGATTTTAAGCAATACGTTCTGGGCGCGCTTTTCTACCGCTTCATCAGTGAGAATTTTTCCAGCTACATGGAAGCAG
GGGATGAGAGCATACATTATGCAGCACTTGATGACAGCATCATTACCGATGACATCAAAGACGATGCCATCAGGACTAAA
GGCTATTTCATCTACCCGAGCCAGCTGTTCTGCAACGTTGCGGCGAAAGCAAATACTAATGACAGACTGAATGCAGATTT
AAACAGCATCTTCGTTGCTATCGAAAGTTCTGCTTACGGTTATCCTTCAGAAGCTGACATCAAAGGTTTGTTTGCTGATT
TCGATACCACCAGTAACCGCCTGGGTAACACCGTTAAAGATAAAAATGCCCGCCTGGCTGCGGTTCTGAAAGGGGTTGAA
GGGTTAAAACTTGGTGACTTCAACGAACATCAGATTGACCTGTTCGGTGATGCCTATGAGTTCCTGATTTCTAACTATGC
GGCAAATGCCGGTAAGTCAGGCGGTGAGTTCTTTACACCGCAGCACGTCTCTAAGCTGATTGCACAACTGGCAATGCATG
GCCAGACCCACGTTAACAAAATCTACGACCCGGCAGCAGGTTCCGGTTCTCTGTTATTGCAGGCTAAAAAGCAGTTTGAT
GACCACATCATCGAAGAAGGTTTTTTTGGTCAGGAGATCAACCATACGACCTATAACCTGGCGCGTATGAACATGTTTTT
GCACAACATCAACTACGACAAGTTTGATATCAAGCTGGGTAATACACTGACTGAGCCACACTTCAGAGATGAAAAACCGT
TTGATGCCATCGTTTCTAACCCGCCGTATTCGGTGAAATGGATTGGCAGCGATGACCCGACGCTGATTAACGATGAGCGT
TTTGCCCCGGCTGGCGTTCTGGCCCCCAAATCCAAAGCTGACTTTGCGTTTGTATTACATGCGCTGAACTATCTTTCGGC
CAAAGGTCGTGCTGCGATTGTCTGCTTCCCGGGTATTTTTTACCGTGGCGGCGCAGAGCAGAAAATCCGTCAATATCTGG
TCGACAATAACTATGTCGAAACCGTGATTTCACTGGCACCGAACCTGTTCTTTGGCACCACCATTGCCGTCAATATTCTG
GTGCTGTCTAAACATAAAACGGATACCAAAGTTCAGTTTATTGATGCCAGCGAATTGTTCAAAAAAGAGACTAACAACAA
TATCCTGACCGATGCCCATATCGAACAGATTATGCAGGTATTTGCCAGCAAGGAAGATGTTGCTCATCTGGCAAAATCTG
TCGCGTTTGAAACCATTGTAGCGAATGACTATAACCTGTCAGTGAGCAGCTATGTGGAAGCGAAAGATAACCGCGAAATA
ATCAATATTGCTGAGTTGAATGCAGAGCTGAAAACCACGGTCAGCAAAATAGACCAGTTGCGCAAAGATATTGATTCAAT
AGTGGCTGAGATTGAAGGTGACGAGGTTCAGGAATGA

Protein sequence :
MTSLQQRAELHRQIWQIANDVRGSVDGWDFKQYVLGALFYRFISENFSSYMEAGDESIHYAALDDSIITDDIKDDAIRTK
GYFIYPSQLFCNVAAKANTNDRLNADLNSIFVAIESSAYGYPSEADIKGLFADFDTTSNRLGNTVKDKNARLAAVLKGVE
GLKLGDFNEHQIDLFGDAYEFLISNYAANAGKSGGEFFTPQHVSKLIAQLAMHGQTHVNKIYDPAAGSGSLLLQAKKQFD
DHIIEEGFFGQEINHTTYNLARMNMFLHNINYDKFDIKLGNTLTEPHFRDEKPFDAIVSNPPYSVKWIGSDDPTLINDER
FAPAGVLAPKSKADFAFVLHALNYLSAKGRAAIVCFPGIFYRGGAEQKIRQYLVDNNYVETVISLAPNLFFGTTIAVNIL
VLSKHKTDTKVQFIDASELFKKETNNNILTDAHIEQIMQVFASKEDVAHLAKSVAFETIVANDYNLSVSSYVEAKDNREI
INIAELNAELKTTVSKIDQLRKDIDSIVAEIEGDEVQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0053 YP_300143.1 type I restriction-modification system methyltransferase subunit Not tested SCC15305cap Protein 8e-92 43
SAKOR_00415 YP_008490599.1 Type I restriction-modification system methylation subunit Not tested vSa¥á Protein 1e-94 43
hsdM NP_645209.1 type I site-specific deoxyribonuclease LldI chain hsdM Not tested vSa¥á Protein 3e-94 43
SAR0433 YP_039884.1 type I restriction enzyme modification protein Not tested vSa¥á Protein 2e-94 43
SAS1732 YP_043848.1 type I restriction enzyme modification protein Not tested vSa¥â Protein 2e-94 43
hsdM2 YP_186690.1 type I restriction-modification system, M subunit Not tested vSa¥â Protein 9e-95 43
hsdM NP_646568.1 hypothetical protein Not tested vSa¥â Protein 2e-94 43
SAR1899 YP_041281.1 type I restriction modification system modification protein Not tested vSa¥â Protein 2e-93 43
hsdM1 YP_185366.1 type I restriction-modification system, M subunit Not tested vSa¥á Protein 8e-95 43
SAV1808 NP_372332.1 type I restriction enzyme EcoR124II M protein Not tested vSa¥â Protein 2e-94 43
hsdM NP_370955.1 type I site-specific deoxyribonuclease LldI chain Not tested vSa¥á Protein 6e-94 43
hsdM YP_001331432.1 type I restriction-modification system, methyltransferase subunit Not tested vSa¥á Protein 8e-95 43
SA1626 NP_374915.1 hypothetical protein Not tested vSa¥â Protein 2e-94 43
SAMSHR1132_03780 YP_005324900.1 putative type I restriction enzyme modification protein Not tested vSa¥á Protein 5e-94 43
hsdM YP_493119.1 type I restriction-modification system, M subunit Not tested vSa¥á Protein 8e-95 43
hsdM NP_373642.1 type I site-specific deoxyribonuclease LldI subunit HsdM Not tested vSa¥á Protein 2e-94 43
SAS0394 YP_042520.1 restriction enzyme modification protein Not tested vSa¥á Protein 4e-94 43
SAMSHR1132_16570 YP_005326167.1 restriction-modification system, M subunit Not tested vSa¥â Protein 3e-94 43
ORF6 BAC22943.1 - Not tested etd PI Protein 3e-94 43
hsdM YP_001332734.1 type I restriction-modification system, methyltransferase subunit Not tested vSa¥â Protein 9e-95 43
hsdM YP_494443.1 type I restriction-modification system, M subunit Not tested vSa¥â Protein 9e-95 43
SAKOR_01757 YP_008491945.1 Type I restriction-modification system methylation subunit Not tested vSa¥â Protein 1e-94 43