Gene Information

Name : CFSAN002050_04520 (CFSAN002050_04520)
Accession : YP_008258860.1
Strain : Salmonella enterica CFSAN002050
Genome accession: NC_021818
Putative virulence/resistance : Virulence
Product : membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 587688 - 589076 bp
Length : 1389 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
GTGAAATATATAAATCATTACCGCTATTTGTTTGTCTGTTTTTTCCTTGCCATACTCCCTTTTTTCGCTTTATCTTTTCC
CGGTATAAGAGAGTATGTTTTTGATAACTTCATGGTTTCTGCAATTTACAATGGAGTCATTATTGCCATTTATATTACAG
GTTCTTTGTGTGCATTATTCACTATTCTTAAAAATATTTCAGCAAAAGACATATTAATAGCTCAGGACGCCAGTAGAAAA
AATAGCATTCTTTCTAACCTCAATCAGGTTTTGTTTGCCGGGGAACCCAAACAGTGTGATTTCAATTTGCTGATGGAATT
AGATGACAATGTGTCTACCGCCCGTAACCAACGATTGTCATTTATTATGAGCTGTAGCAATGTGTCGACGCTTGTTGGCC
TGTTGGGGACGTTTGCAGGTCTGTCTATTACGATTGGTTCAATCGGGAACTTATTGAGCTCGCCATCAGATGTTGGCGGT
GATAATGCAAGTAATACACTCAATATGATCGTGACAATGGTAGCGTCGCTTTCTGAACCATTGAAAGGGATGAATACCGC
ATTTGTATCTTCTATCTATGGTGTTGTTTGCGCCATCCTCCTGACCTCACAAAGTGTTTTTGTTCGCAGCTCCTATTCCC
TTGTTTCTACGGAAATCAAAAAATTAAAAATCATAAGCAACAGATCCAATAATAAACAGCGAAGCCTGCGGGTTGAATCA
GAGACGCTTGTAGAATTTAAAGAGTTGTTTAAAGCTTTTTTTGATAACTATCTGTCAGTTGAAAATTTACGGACGCAGGA
TGAAGAAAAGAAACGAGAGATGCTATCAGATAGCTTTGTCACTTTGCAAAACCGGCTATTGGATAACTCAGCAAAACTAG
AGCAACTTTCTACGCTGATTGATGGTTATCTGGTAAGCAGTAACGAAAATCTCAAAAAATTATCTGACGGTGTAATAACA
ATTACCTCGCGTTTATCTGAAGGTAATATCCTGCTTGCTGATAATAATGCACGACTGGAGGCAATGAGTACAATACAAAA
TATTATAGATAAAAAGAATGATTCAATAATGGCATCAGTTGATAAATGTTATCAGGAATCTCTTTCACATGGTAAGACCA
TAAACGATATTGCCGCTGGCAGTGCCGATATTTCCCATACTCTCGATGGGCTGAGAAAAGAAATGGATGAGGATATGAAT
AATGTTCATTTAGCGCTATCCGATCTATCGGCTACTGATAAAAAGATTATTACTAATACTAAAGAGATTAGTGCTGAAAT
GGTTAGCTACCGTGATACCTATATGCCATTAATGGAAAAAATAACATCTATGCATCAGGAAATAGTAAAGCAACGTTTGT
TAAACAAGGAGGAAAAAAATGAAGATTAA

Protein sequence :
MKYINHYRYLFVCFFLAILPFFALSFPGIREYVFDNFMVSAIYNGVIIAIYITGSLCALFTILKNISAKDILIAQDASRK
NSILSNLNQVLFAGEPKQCDFNLLMELDDNVSTARNQRLSFIMSCSNVSTLVGLLGTFAGLSITIGSIGNLLSSPSDVGG
DNASNTLNMIVTMVASLSEPLKGMNTAFVSSIYGVVCAILLTSQSVFVRSSYSLVSTEIKKLKIISNRSNNKQRSLRVES
ETLVEFKELFKAFFDNYLSVENLRTQDEEKKREMLSDSFVTLQNRLLDNSAKLEQLSTLIDGYLVSSNENLKKLSDGVIT
ITSRLSEGNILLADNNARLEAMSTIQNIIDKKNDSIMASVDKCYQESLSHGKTINDIAAGSADISHTLDGLRKEMDEDMN
NVHLALSDLSATDKKIITNTKEISAEMVSYRDTYMPLMEKITSMHQEIVKQRLLNKEEKNED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STM4258 NP_463123.1 methyl-accepting chemotaxis protein Not tested SPI-4 Protein 0.0 99
siiB CAE11794.1 putative inner membrane protein Virulence SPI-4 Protein 0.0 99
STY4453 NP_458555.1 putative integral membrane protein Not tested SPI-4 Protein 0.0 99
mac YP_219124.1 methyl-accepting chemotaxis protein Not tested SPI-4 Protein 0.0 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002050_04520 YP_008258860.1 membrane protein VFG0578 Protein 0.0 99