Gene Information

Name : CFSAN002050_04515 (CFSAN002050_04515)
Accession : YP_008258859.1
Strain : Salmonella enterica CFSAN002050
Genome accession: NC_021818
Putative virulence/resistance : Virulence
Product : membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 587059 - 587691 bp
Length : 633 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGGAAGACGAAAGTAATCCGTGGCCTAGTTTTGTTGATACATTCTCTACGGTATTGTGCATTTTTATATTTCTTATGTT
GGTGTTTGCACTTAATAATATGATTATTATGTATGACAACTCAATTAAAGTTTATAAAGCAAATATAGAGAGTAAGACTA
AATCTACTGCTCAAAATAGCGGAGCCAATGACAATTCAAATGCTAATGAAATAATTAATAAGGAAGTGAATACCCAAGAT
ATGTCGGACGGAATGACTACAATGTCAGGTAAGGAGGTTGGAGTATACGATATCGCCGATGGTCAGAAAACTGATATAAC
GTCTACAAAAAATGAGCTTGTTATTACGTATCATGGCAGGCTGAGAAGCTTTTCAGAAGAGGACACTCATAAAATAAAGG
CTTGGTTAGAAGACAAAATCAATAGTAATTTATTGATAGAAATGGTTATTCCTCAGGCAGACATCTCTTTCTCTGACTCT
CTACGACTGGGATATGAACGGGGAATTATTTTGATGAAAGAGATTAAAAAAATATATCCTGATGTAGTTATTGACATGAG
TGTTAACTCCGCAGCATCAAGTACAACGAGTAAAGCTATTATCACGACTATTAATAAAAAGGTGTCAGAGTGA

Protein sequence :
MEDESNPWPSFVDTFSTVLCIFIFLMLVFALNNMIIMYDNSIKVYKANIESKTKSTAQNSGANDNSNANEIINKEVNTQD
MSDGMTTMSGKEVGVYDIADGQKTDITSTKNELVITYHGRLRSFSEEDTHKIKAWLEDKINSNLLIEMVIPQADISFSDS
LRLGYERGIILMKEIKKIYPDVVIDMSVNSAASSTTSKAIITTINKKVSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SC4136 YP_219123.1 hypothetical protein Not tested SPI-4 Protein 1e-82 98
siiA CAE11793.1 putative inner membrane or exported protein Virulence SPI-4 Protein 3e-82 97
STM4257 NP_463122.1 hypothetical protein Not tested SPI-4 Protein 4e-82 97
STY4452 NP_458554.1 putative exported protein Not tested SPI-4 Protein 3e-82 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002050_04515 YP_008258859.1 membrane protein VFG0577 Protein 1e-82 97