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Name : araD (CFSAN002050_25355) Accession : YP_008262921.1 Strain : Salmonella enterica CFSAN002050 Genome accession: NC_021818 Putative virulence/resistance : Unknown Product : L-ribulose-5-phosphate 4-epimerase Function : - COG functional category : - COG ID : - EC number : 5.1.3.4 Position : 4920619 - 4921314 bp Length : 696 bp Strand : + Note : catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source DNA sequence : ATGTTAGAGCAACTGAAAGCCGAGGTGCTGGCGGCCAACCTGGCCCTCCCGGCGCACGGGCTGGTCACCTTTACCTGGGG CAACGTCAGCGCGGTCGATGAGACGCGCAAGCTGATGGTCATTAAGCCTTCCGGCGTCGAATATGAGGTGATGACCGCCG ACGATATGGTGGTGGTAGAGATCGCCAGCGGTAAGGTCGTTGAAGGCAACAAAAAACCGTCGTCCGATACCGCGACCCAT CTGGCGCTCTATCGCCGCTATCCGCAGATCGGTGGGATCGTGCATACCCATTCCCGCCATGCGACGATCTGGTCGCAGGC CGGGCTCGATCTGCCCGCCTGGGGCACCACCCACGCCGACTATTTCTATGGCGCGATCCCCTGTACCCGACTGATGACCG TTGAGGAAATTAACGGCGAGTACGAGTATCAGACCGGCGAGGTGATTATTAAAACCTTTGAAGAGCGCGGTCTGGATCCG GCGCAAATCCCGGCGGTATTGGTTCATTCACACGGCCCGTTTGCCTGGGGTAAAAATGCCGCCGATGCCGTCCACAACGC CGTGGTGCTTGAGGAGTGTGCCTATATGGGGCTGTTCTCGCGCCAGCTGGCCCCGCAGCTACCGGATATGCAGCCTGAAC TGCTCGATAAACACTATCTGCGTAAACACGGCGCGAATGCCTATTACGGGCAGTAA Protein sequence : MLEQLKAEVLAANLALPAHGLVTFTWGNVSAVDETRKLMVIKPSGVEYEVMTADDMVVVEIASGKVVEGNKKPSSDTATH LALYRRYPQIGGIVHTHSRHATIWSQAGLDLPAWGTTHADYFYGAIPCTRLMTVEEINGEYEYQTGEVIIKTFEERGLDP AQIPAVLVHSHGPFAWGKNAADAVHNAVVLEECAYMGLFSRQLAPQLPDMQPELLDKHYLRKHGANAYYGQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| araD | YP_281517.1 | L-ribulose-5-phosphate 4-epimerase | Not tested | Not named | Protein | 6e-59 | 54 |
