Gene Information

Name : CFSAN002050_25165 (CFSAN002050_25165)
Accession : YP_008262883.1
Strain : Salmonella enterica CFSAN002050
Genome accession: NC_021818
Putative virulence/resistance : Virulence
Product : fimbrial chaperone protein FimC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4882288 - 4882986 bp
Length : 699 bp
Strand : -
Note : involved in type 1 fimbriae biosynthesis, interacts with FimH; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGAACCGCTCACGTTTGATATCTTGCACAGCACTGGTGCTGGCGCTGATTGCTCAAAACAGTTTTGCCGGTGGCGTGGC
ATTAAGCAGCACACGTGTTATTTATGACGGTAGTAGAAAGGAAGCTTCTCTTACGGTAAATAATAAAAGCACCACGGATG
AATTTCTCATTCAGTCATGGATTGATGATGCTAACGGTAATAAAAAGACGCCCTTTATTATCACTCCGCCGTTATTTAAA
TTAAGCCCGACTAAAAATAACGTTTTACGTATTGTTAATACGACGAGCACGTTACCGCAGGATCGCGAGTCCGTTTATTG
GATTAACGTAAAAGCTATTCCTGCCAAAAGTGAAGACGCGGAAGCTAAAAACGTACTGCAGATCGCCGTACGTACCCGCT
TAAAACTGTTCTATCGTCCGGCGGGCCTGAAAGGCAATAGCATGGACGGCTGGAACAAACTGCAGTTCACCAGCGCAGGG
GCTAACCAGATCAAAGTGGAAAACCCATCTGCCTTTAACCTGACGTTTAATAAATTTTATGCCAACGGCCGTGATATTGA
AAAAACGGGAATGGTTCCGGCAAAAGGCTCATTGAATATTGAACTGCCAGCCGGCACCGGCAAGGTAAGCGAAGTTAAAT
ACAACATTATTAATGACTTTGGCACGGCTGGCGACATGTTGACACAGCGCGTTAACTAA

Protein sequence : 
MNRSRLISCTALVLALIAQNSFAGGVALSSTRVIYDGSRKEASLTVNNKSTTDEFLIQSWIDDANGNKKTPFIITPPLFK
LSPTKNNVLRIVNTTSTLPQDRESVYWINVKAIPAKSEDAEAKNVLQIAVRTRLKLFYRPAGLKGNSMDGWNKLQFTSAG
ANQIKVENPSAFNLTFNKFYANGRDIEKTGMVPAKGSLNIELPAGTGKVSEVKYNIINDFGTAGDMLTQRVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 3e-40 41
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 5e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002050_25165 YP_008262883.1 fimbrial chaperone protein FimC VFG0455 Protein 4e-104 99
CFSAN002050_25165 YP_008262883.1 fimbrial chaperone protein FimC VFG0445 Protein 2e-40 42
CFSAN002050_25165 YP_008262883.1 fimbrial chaperone protein FimC VFG1644 Protein 3e-38 41
CFSAN002050_25165 YP_008262883.1 fimbrial chaperone protein FimC VFG0911 Protein 3e-38 41