Gene Information

Name : CFSAN002050_22395 (CFSAN002050_22395)
Accession : YP_008262345.1
Strain : Salmonella enterica CFSAN002050
Genome accession: NC_021818
Putative virulence/resistance : Unknown
Product : DNA topoisomerase III
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4297869 - 4299890 bp
Length : 2022 bp
Strand : -
Note : decatenates replicating daughter chromosomes; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGCAACTCTTTCTGTGTGAAAAACCCTCCCAGGCAAAGGATATTGCCCGCGTGCTGGGTATCAGCAAGCGTGAGCAGGG
ATTTATCAGCGGCGGTAACATCGTTGTGACCTGGGCGGTCGGCCATTTACTCGAAACTGCCAGCCCTGAAGCCTATGGCG
AGCAGTATGGCAGGCCATGGCGTGCCGATGTTCTGCCTGTGCTGCCTGAGGCCTGGAAAATGGTCGTTAAAGAGCAGACA
AAATCGCAGTTCACCGTTATCAGTAAGCTGCTCAAAAAGGCGTCTGAAGTGGTCATCGCAACCGATGCCGACCGCGAGGG
CGAGGTGATCGCTCGTGAGCTGATGGAATACTGCCGCTACAGTGGCGCGGTACGCCGGCTCTGGTTGTCAGCCCTGGATG
AGGCCAGTGTGAAGGAAGCACTTAGCAGTATTCTTCCGGGGGAAAAAACAGCCCTGCTGTATGATGCCGGCAAGGGCAGG
AGCCAGGCGGACTGGCTCATTGGCATGAACCTGACGCGTCTTTATACCCTTAAGGCCCGTGACTCAGGGGTGTCAGAAGT
GCTGTCCGTCGGGCGGGTACAGACGCCGACGCTTGCTATGGTGGTTAACAGGGATAATGAAATCACATCCTTCGTGCCAA
AGCCCTGGTGGCAGGTACATGCGCTTATTGAAAAAGAGGGCGTCCGGTTCCGGGCAGTCTGGGTGCCCGTTGAGCAGTAC
TGTGATGAGGAAAAGCGTTGCATCAATCCCCAGGCCGCCCGGGCGGTGGGGCAGTTGTGTCAGCAGCAGGGCAGGGCTGT
GGTACTGGAGGTAACACAGAAGCGGGAAAAAACGGCGGCCCCCCTCTGTTTTGACCTGGGCACCCTTCAGCAGGTCTGCT
CCCGAAAGTTCGGCATGGGCGCAAATGATGTGCTCGCCATTGCCCAATCCCTCTACGAAACCCACAAAGCGACCACCTAC
CCCCGGACAGATTGCGGTTTCCTTCCAACTTCGATGCAGCAGGAAATACCCGACGTTCTGGCGGCAGTGGCAAAATCCGA
TCCCGCTGTGGCCCCGGTACTGAATCAGCTGGACAGGAAGTTTGTCTCGCGTGTCTGGAATGACAAGAAAATCACCGCGC
ACCATGCCATCATTCCCACCCGACAGGCATTTGATTTGTCGCGCCTCAGCGCCGATGAGCTGAAGGTCTACCATCTGATT
CGCCAGCATTATTTCGCCCAGTTCCTTCCGCTGCAGGAATCTGACGTGACGGAGGCGTCTTTCAATATCGGTGGTCAGCT
GTTCCGTACACGCGGGAAAGTCGGTGTGGTGACGGGCTGGAAGTCATTGTTCCAGGCTGAAAAAGATGACGATGAAGAGG
ACGTCGACGGTGACAGTATGGCGCTGCCGGCGCTGGCAAAAGGGGATATTTGCGCTGTCACCGGTTCTGAGGTTAAAGAT
ATGAAAACCAGTCCGCCTAAACCGTTCACGGAGGGGACGTTGATTGCTGCCATGAAGAACGCGGCCAGTTTCGTCAGTGA
CCCGAAGCTCAAGAAAGTGCTGCGTGATAACGCAGGTCTGGGCACAGAGGCGACGCGTGCGGCAGTACTCGAAACCCTCT
TCAAACGACACTATCTGGAGAAAAAAGGGAAGCACATCCACTCAACGCAGATGGCCCGGGAGCTGATTGCGGCCCTGCCG
GAAACGCTGACGAGCCCGGGCATGACCGCATTATGGGAGCAGGCACTGGATGATATTTCGCAGGGGAAAATGTCGCTTGC
GGTCTTTATGCAAAAGCAGCTGCAGTGGACCCGTCACCTTGTCGAAAAAGGCCGCCAGGACAGTGTGAAAATCACCGCTC
CCGTCACGCCCCCTTGTCCGTTATGCAAAGGGCCCACACGTAAACGCAAAGGTAAGAAAGGAGATTTTTGGGGTTGCGTG
CGTTACCCAGACTGCAAAGGTATTATTAACACCAACGGGAAAAAGACCACAAAGCGCAAAAAAGCAGCATCAGGGACAAA
AACAGAATCATCCGCACAGTGA

Protein sequence :
MQLFLCEKPSQAKDIARVLGISKREQGFISGGNIVVTWAVGHLLETASPEAYGEQYGRPWRADVLPVLPEAWKMVVKEQT
KSQFTVISKLLKKASEVVIATDADREGEVIARELMEYCRYSGAVRRLWLSALDEASVKEALSSILPGEKTALLYDAGKGR
SQADWLIGMNLTRLYTLKARDSGVSEVLSVGRVQTPTLAMVVNRDNEITSFVPKPWWQVHALIEKEGVRFRAVWVPVEQY
CDEEKRCINPQAARAVGQLCQQQGRAVVLEVTQKREKTAAPLCFDLGTLQQVCSRKFGMGANDVLAIAQSLYETHKATTY
PRTDCGFLPTSMQQEIPDVLAAVAKSDPAVAPVLNQLDRKFVSRVWNDKKITAHHAIIPTRQAFDLSRLSADELKVYHLI
RQHYFAQFLPLQESDVTEASFNIGGQLFRTRGKVGVVTGWKSLFQAEKDDDEEDVDGDSMALPALAKGDICAVTGSEVKD
MKTSPPKPFTEGTLIAAMKNAASFVSDPKLKKVLRDNAGLGTEATRAAVLETLFKRHYLEKKGKHIHSTQMARELIAALP
ETLTSPGMTALWEQALDDISQGKMSLAVFMQKQLQWTRHLVEKGRQDSVKITAPVTPPCPLCKGPTRKRKGKKGDFWGCV
RYPDCKGIINTNGKKTTKRKKAASGTKTESSAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
topB NP_807836.1 DNA topoisomerase III Not tested SPI-7 Protein 0.0 60
topB AAF14809.1 topoisomerase B Not tested SPI-7 Protein 0.0 60
topB NP_458624.1 topoisomerase B Not tested SPI-7 Protein 0.0 60
PMI2630 YP_002152332.1 DNA topoisomerase III Not tested Not named Protein 0.0 58
pph56 CAI36097.1 Topoisomerase IA Not tested PPHGI-1 Protein 1e-162 52
topB AAN62194.1 putative DNA topoisomerase III Not tested PAGI-2(C) Protein 3e-160 50
topB AAN62317.1 putative DNA topoisomerase III Not tested PAGI-3(SG) Protein 3e-157 50
topB1 YP_005176228.1 DNA topoisomerase III Not tested ICEPmu1 Protein 2e-149 49
topB AAW83109.1 TopB Not tested GGI Protein 7e-124 43