|
Name : CFSAN002050_22395 (CFSAN002050_22395) Accession : YP_008262345.1 Strain : Salmonella enterica CFSAN002050 Genome accession: NC_021818 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : - COG ID : - EC number : - Position : 4297869 - 4299890 bp Length : 2022 bp Strand : - Note : decatenates replicating daughter chromosomes; Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGCAACTCTTTCTGTGTGAAAAACCCTCCCAGGCAAAGGATATTGCCCGCGTGCTGGGTATCAGCAAGCGTGAGCAGGG ATTTATCAGCGGCGGTAACATCGTTGTGACCTGGGCGGTCGGCCATTTACTCGAAACTGCCAGCCCTGAAGCCTATGGCG AGCAGTATGGCAGGCCATGGCGTGCCGATGTTCTGCCTGTGCTGCCTGAGGCCTGGAAAATGGTCGTTAAAGAGCAGACA AAATCGCAGTTCACCGTTATCAGTAAGCTGCTCAAAAAGGCGTCTGAAGTGGTCATCGCAACCGATGCCGACCGCGAGGG CGAGGTGATCGCTCGTGAGCTGATGGAATACTGCCGCTACAGTGGCGCGGTACGCCGGCTCTGGTTGTCAGCCCTGGATG AGGCCAGTGTGAAGGAAGCACTTAGCAGTATTCTTCCGGGGGAAAAAACAGCCCTGCTGTATGATGCCGGCAAGGGCAGG AGCCAGGCGGACTGGCTCATTGGCATGAACCTGACGCGTCTTTATACCCTTAAGGCCCGTGACTCAGGGGTGTCAGAAGT GCTGTCCGTCGGGCGGGTACAGACGCCGACGCTTGCTATGGTGGTTAACAGGGATAATGAAATCACATCCTTCGTGCCAA AGCCCTGGTGGCAGGTACATGCGCTTATTGAAAAAGAGGGCGTCCGGTTCCGGGCAGTCTGGGTGCCCGTTGAGCAGTAC TGTGATGAGGAAAAGCGTTGCATCAATCCCCAGGCCGCCCGGGCGGTGGGGCAGTTGTGTCAGCAGCAGGGCAGGGCTGT GGTACTGGAGGTAACACAGAAGCGGGAAAAAACGGCGGCCCCCCTCTGTTTTGACCTGGGCACCCTTCAGCAGGTCTGCT CCCGAAAGTTCGGCATGGGCGCAAATGATGTGCTCGCCATTGCCCAATCCCTCTACGAAACCCACAAAGCGACCACCTAC CCCCGGACAGATTGCGGTTTCCTTCCAACTTCGATGCAGCAGGAAATACCCGACGTTCTGGCGGCAGTGGCAAAATCCGA TCCCGCTGTGGCCCCGGTACTGAATCAGCTGGACAGGAAGTTTGTCTCGCGTGTCTGGAATGACAAGAAAATCACCGCGC ACCATGCCATCATTCCCACCCGACAGGCATTTGATTTGTCGCGCCTCAGCGCCGATGAGCTGAAGGTCTACCATCTGATT CGCCAGCATTATTTCGCCCAGTTCCTTCCGCTGCAGGAATCTGACGTGACGGAGGCGTCTTTCAATATCGGTGGTCAGCT GTTCCGTACACGCGGGAAAGTCGGTGTGGTGACGGGCTGGAAGTCATTGTTCCAGGCTGAAAAAGATGACGATGAAGAGG ACGTCGACGGTGACAGTATGGCGCTGCCGGCGCTGGCAAAAGGGGATATTTGCGCTGTCACCGGTTCTGAGGTTAAAGAT ATGAAAACCAGTCCGCCTAAACCGTTCACGGAGGGGACGTTGATTGCTGCCATGAAGAACGCGGCCAGTTTCGTCAGTGA CCCGAAGCTCAAGAAAGTGCTGCGTGATAACGCAGGTCTGGGCACAGAGGCGACGCGTGCGGCAGTACTCGAAACCCTCT TCAAACGACACTATCTGGAGAAAAAAGGGAAGCACATCCACTCAACGCAGATGGCCCGGGAGCTGATTGCGGCCCTGCCG GAAACGCTGACGAGCCCGGGCATGACCGCATTATGGGAGCAGGCACTGGATGATATTTCGCAGGGGAAAATGTCGCTTGC GGTCTTTATGCAAAAGCAGCTGCAGTGGACCCGTCACCTTGTCGAAAAAGGCCGCCAGGACAGTGTGAAAATCACCGCTC CCGTCACGCCCCCTTGTCCGTTATGCAAAGGGCCCACACGTAAACGCAAAGGTAAGAAAGGAGATTTTTGGGGTTGCGTG CGTTACCCAGACTGCAAAGGTATTATTAACACCAACGGGAAAAAGACCACAAAGCGCAAAAAAGCAGCATCAGGGACAAA AACAGAATCATCCGCACAGTGA Protein sequence : MQLFLCEKPSQAKDIARVLGISKREQGFISGGNIVVTWAVGHLLETASPEAYGEQYGRPWRADVLPVLPEAWKMVVKEQT KSQFTVISKLLKKASEVVIATDADREGEVIARELMEYCRYSGAVRRLWLSALDEASVKEALSSILPGEKTALLYDAGKGR SQADWLIGMNLTRLYTLKARDSGVSEVLSVGRVQTPTLAMVVNRDNEITSFVPKPWWQVHALIEKEGVRFRAVWVPVEQY CDEEKRCINPQAARAVGQLCQQQGRAVVLEVTQKREKTAAPLCFDLGTLQQVCSRKFGMGANDVLAIAQSLYETHKATTY PRTDCGFLPTSMQQEIPDVLAAVAKSDPAVAPVLNQLDRKFVSRVWNDKKITAHHAIIPTRQAFDLSRLSADELKVYHLI RQHYFAQFLPLQESDVTEASFNIGGQLFRTRGKVGVVTGWKSLFQAEKDDDEEDVDGDSMALPALAKGDICAVTGSEVKD MKTSPPKPFTEGTLIAAMKNAASFVSDPKLKKVLRDNAGLGTEATRAAVLETLFKRHYLEKKGKHIHSTQMARELIAALP ETLTSPGMTALWEQALDDISQGKMSLAVFMQKQLQWTRHLVEKGRQDSVKITAPVTPPCPLCKGPTRKRKGKKGDFWGCV RYPDCKGIINTNGKKTTKRKKAASGTKTESSAQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 0.0 | 60 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 0.0 | 60 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 0.0 | 60 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 0.0 | 58 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 1e-162 | 52 |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 3e-160 | 50 |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 3e-157 | 50 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 2e-149 | 49 |
| topB | AAW83109.1 | TopB | Not tested | GGI | Protein | 7e-124 | 43 |
