Gene Information

Name : CFSAN002050_22295 (CFSAN002050_22295)
Accession : YP_008262326.1
Strain : Salmonella enterica CFSAN002050
Genome accession: NC_021818
Putative virulence/resistance : Unknown
Product : integrating conjugative element protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4284624 - 4285574 bp
Length : 951 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGAGTAAAAACCCCCACTACCGCGCCGGGCTGATGGCGCTGTCCTTCGCCCTGCTGCCCCTGGCAATGCTGGTATCACG
TCCTGCCGGCGCAGATGAGCTGATGAAATGGGAGCGTATTCCGCTGCAGATCCCCCTGAAGGTGGGGCAGGAGCGGGTGG
TCTTTGTGGACAAAAACGTCCGCGTCGGTTTTCCGCCGGCGCTTAACGGTAAACTCCGGGTGCAGAGCACCGGGGGAGCC
GTCTACCTGAAAGCCGACAGCGCCTTTCCGCAGACGCGGGTGCAGCTGCAGGATGTGGAAAGCGGCGAGGTTCTGCTGTT
TGATATCGCCGCCGGTGAAAAAGGGCCGACTGAGCCGGTGCGGCTGGTCTACAGCGGTGATGTCAGCACGCTGAGTCACG
CCGGCGATGCGGCCGGTCAGCCAGGTGGTGCAGACCGGGCTGCTTCCGGATCAGGCTCATCTGCTCCCACCGGCAGCGAT
GATGGTACTCAGGCAAAGCGTAAAAAAATCCGCTACAGCGCCCCCATCCCGGTGCTGCTGACCCGATATGCCGCTCAGAG
CCTTTATGCTCCGGCACGTACGGTCGAGGCGGTCCCGGGTATTCATCCGGTCAATCCTCATCTGCCCCGACGTGTCAGCA
CGCTGTATCCCTCTGAACCATTAACGGTCACGCCGCTGGCTGGCTGGGGTGTGGCAAACCGCAGCGTGGTGGCACTCAGG
CTCACGAACACCGGCAGCCGTAAGGTCGTTCTGGATCCACGCTCGCTGCAGGGACAGTTTGTGTCCGCCACCTTCCAGCA
CCGCTGGGTCGGTCCGGCCGGCACGCCTGAAGACACCACCACGGTGTATGTGGTGACCGCCGGTCGTCCGGAGAGCGCAT
TCATTGCTGAGCCGTCTGCACTGCGTAAAGCGACCCGCACGGTAAAACAGGAGGCCCGCCATGCAGATTAA

Protein sequence :
MSKNPHYRAGLMALSFALLPLAMLVSRPAGADELMKWERIPLQIPLKVGQERVVFVDKNVRVGFPPALNGKLRVQSTGGA
VYLKADSAFPQTRVQLQDVESGEVLLFDIAAGEKGPTEPVRLVYSGDVSTLSHAGDAAGQPGGADRAASGSGSSAPTGSD
DGTQAKRKKIRYSAPIPVLLTRYAAQSLYAPARTVEAVPGIHPVNPHLPRRVSTLYPSEPLTVTPLAGWGVANRSVVALR
LTNTGSRKVVLDPRSLQGQFVSATFQHRWVGPAGTPEDTTTVYVVTAGRPESAFIAEPSALRKATRTVKQEARHAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4569 NP_458654.1 hypothetical protein Not tested SPI-7 Protein 2e-75 58
t4266 NP_807864.1 hypothetical protein Not tested SPI-7 Protein 2e-75 58
PMI2580 YP_002152299.1 hypothetical protein Not tested Not named Protein 3e-75 56
api36 CAF28510.1 hypothetical protein Not tested YAPI Protein 6e-70 53
YpsIP31758_3708 YP_001402662.1 hypothetical protein Not tested YAPI Protein 2e-69 52
YE3485 YP_001007644.1 hypothetical protein Not tested YAPI Protein 9e-69 52
ORF C50 AAN62144.1 hypothetical protein Not tested PAGI-2(C) Protein 8e-48 48
EXA36 ABD94645.1 conserved hypothetical protein Not tested ExoU island A Protein 7e-47 47
RL025 AAP84152.1 conserved hypothetical protein Not tested PAPI-1 Protein 9e-47 46
unnamed ABR13365.1 hypothetical protein Not tested PAGI-5 Protein 1e-46 46
Pmu_03100 YP_005176209.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 5e-57 43
pph81 CAI36122.1 hypothetical protein Not tested PPHGI-1 Protein 1e-46 43