|
Name : CFSAN002050_22160 (CFSAN002050_22160) Accession : YP_008262299.1 Strain : Salmonella enterica CFSAN002050 Genome accession: NC_021818 Putative virulence/resistance : Unknown Product : DNA polymerase V subunit UmuC Function : - COG functional category : - COG ID : - EC number : 2.7.7.7 Position : 4256829 - 4258109 bp Length : 1281 bp Strand : - Note : binds processed UmuD protein to form functional DNA pol V (UmuD'2UmuC); involved in translesion polymerization; Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGTCCATGTTCGGCCTGGCTGACGTTAATTCATTCTATGCCAGCTGCGAGACGCTGTTCCGCCCGGACCTGCGTGGCAG ACCTGTGCTAGTGCTCAGCAACAACGACGGATGCGTCATTGCACGCTCCGCTGGCGCAAAAGCGCTTGGCATCAAAATGG GTGCGCCATGGTTTGAGGTAAAAACACAGGATTATCCGGAAAAGGTGCACGTGTTCAGCTCCAATTACGCGCTTTATCAC AGCCTCAGCCAGAGAGTAATGACCGCGCTTGAAGAGATAACGCCACGCGTCGAGCAGTACAGCATTGATGAGATGTTTCT GGATCTCACCGGTATTGACGGCTGTGAGAACTTCGAAACTTTTGGCCGTCGCCTGCGTGCGCATGTCTTTACCACAACGG GTCTCACCGTCGGTATCGGCATGGGGCCGACCAAAACACTGGCAAAATCGGCCCAGTGGGCGGGCAAGGAGTGGAAGCAG TTTCGCGGCGTACTGGCGCTTACGCCAGGTAATCCGAAACGTACTGAAACCCTGCTGGCTAACCAGCCCGTTGAGGAAAT ATGGGGCGTGGGACGGCGTATCGGTAAACGACTCAACCTTATGGGCATCGAAACTGCTCTGCAGCTATCACGCGCGCGTC CGAAGTTCATTCGCGATAACTTTTCCGTGGTGCTGGAGCGCACCGTACGCGAGCTGAACGGTGAATCATGTATTCCGCTC GAAGAGCTGCCACCGGCAAAACAGCAGATTGTCTGTAGCCGCAGCTTCGGCGAGCGAATTACCTCAAAAGTCGCTATGCA GCAGGCGCTGTGTCAGTACGCTGCGCGCGCAGCGGAAAAACTGCGCGGGGAACGTCAGTACTGTCGCAACATCGGTGTGT TTATCCGGACGTCGCCACACGCAAACGGTGAGGTTTTTTACGGGAACAGCGCTGGTGAGAAACTGACGCTGCCAACACAG GACACGCGTGACATTATTGAATCTGCGATGCGATCACTTGACCGTATCTGGCTTGAGGGTCGAAGGTACATGAAAGCAGG TATCATGCTTGATAACTTCACTCCAAACGGTGTAAGCCAGCTCAATCTGTTTGAAGATAACCAGCCGCGGGCCAATAGCG CACAGCTGATGAAGGTACTGGATGATATCAACCAGTCCGGAATGGGAAATGTATGGTTTGCGGGCCAGGGCATTAATACC GAATGGAAAATGAAACGTGAAATGCTAAGCCCTGCTTGGACCACGCGCTGGTCTGACATACCTAAAGCGCGCGTGCTTTG A Protein sequence : MSMFGLADVNSFYASCETLFRPDLRGRPVLVLSNNDGCVIARSAGAKALGIKMGAPWFEVKTQDYPEKVHVFSSNYALYH SLSQRVMTALEEITPRVEQYSIDEMFLDLTGIDGCENFETFGRRLRAHVFTTTGLTVGIGMGPTKTLAKSAQWAGKEWKQ FRGVLALTPGNPKRTETLLANQPVEEIWGVGRRIGKRLNLMGIETALQLSRARPKFIRDNFSVVLERTVRELNGESCIPL EELPPAKQQIVCSRSFGERITSKVAMQQALCQYAARAAEKLRGERQYCRNIGVFIRTSPHANGEVFYGNSAGEKLTLPTQ DTRDIIESAMRSLDRIWLEGRRYMKAGIMLDNFTPNGVSQLNLFEDNQPRANSAQLMKVLDDINQSGMGNVWFAGQGINT EWKMKREMLSPAWTTRWSDIPKARVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 2e-158 | 73 |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 2e-158 | 73 |
| rulB | CAI36137.1 | nucleotidyltransferase/DNA polymerase | Not tested | PPHGI-1 | Protein | 8e-78 | 45 |
| unnamed | ABR13403.1 | DNA-directed DNA polymerase | Not tested | PAGI-5 | Protein | 3e-58 | 41 |
