Gene Information

Name : CFSAN002050_22125 (CFSAN002050_22125)
Accession : YP_008262292.1
Strain : Salmonella enterica CFSAN002050
Genome accession: NC_021818
Putative virulence/resistance : Unknown
Product : transposase IS3
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4250219 - 4251031 bp
Length : 813 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
GTGCTGGATGTTCATCCCAGTGGTTTTTACGCCTGGCTTCAGCAGCCGCATTCACAACGCCATCAGGCAGACCTGAGACT
GACAGGACAGATTAAACAGTTCTGGCTGGAATTGGGATGCGTCTATGGTTATCGCAAAATCCATCTGGATCTGCGTGACA
GCGGGCAACAGTGCGGAGTAAACAGAGTCTGGAGACTGATGAAACGTGTCGGAATAAAGGCTCAGGTCGGATACCGAAGC
CCGCGGGCACGTAAAGGCGAGGCCAGTATCGTGTCACCCAACAGGCTCCAGCGACAGTTCAATCCGGATGCTCCTGATGA
GCGTTGGGTAACGGACATAACCTACATCAGGACCCACGAAGGCTGGCTGTATCTTGCCGTTGTTGTTGATCTGTTCTCAC
GCAAAATTATCGGCTGGTCCATGCAATCCCGGATGACAAAGGACATTGTCCTGAACGCACTGCTGATGGCTGTATGGCGG
CGTAATCCCGAAAAACAGGTGCTGGTTCATTCGGATCAGGGCAGTCAGTACACAAGCCATGAGTGGCAGTCGTTCCTGAA
ATCACACGGCCTGGAGGGTAGCATGAGCCGTCGCGGTAACTGCCATGATAATGCGGTTGCAGAAAGTTTTTTCCAGTTGT
TGAAACGTGAACGGATAAAGAAAAAGATCTACGGAACGCGAGAAGAAGCCCGCAGTGATATTTTTGATTACATCGAAATG
TTTTATAACAGTAAGCGTCGGCATGGTTCTAGCGAACAGATGTCACCGACAGAATATGAAAAACAGTATTATCAACGGCT
CGGAAGTGTCTAG

Protein sequence :
MLDVHPSGFYAWLQQPHSQRHQADLRLTGQIKQFWLELGCVYGYRKIHLDLRDSGQQCGVNRVWRLMKRVGIKAQVGYRS
PRARKGEASIVSPNRLQRQFNPDAPDERWVTDITYIRTHEGWLYLAVVVDLFSRKIIGWSMQSRMTKDIVLNALLMAVWR
RNPEKQVLVHSDQGSQYTSHEWQSFLKSHGLEGSMSRRGNCHDNAVAESFFQLLKRERIKKKIYGTREEARSDIFDYIEM
FYNSKRRHGSSEQMSPTEYEKQYYQRLGSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpB CAB61574.1 transposase B Not tested HPI Protein 9e-45 45
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 2e-40 45
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 7e-41 45
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 6e-44 44
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 6e-40 44
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 1e-29 42
unnamed CAI43898.1 putative transposase Not tested LEE Protein 1e-29 42
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 4e-29 42
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 4e-29 42
ECO111_3779 YP_003236114.1 putative IS602 transposase OrfB Not tested LEE Protein 2e-29 42
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 2e-28 41
unnamed AAC31485.1 L0006 Not tested LEE Protein 1e-28 41
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 2e-39 41
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 2e-39 41
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 2e-39 41
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 1e-28 41
Z5089 NP_290241.1 transposase Not tested LEE Protein 2e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002050_22125 YP_008262292.1 transposase IS3 VFG1484 Protein 2e-29 42
CFSAN002050_22125 YP_008262292.1 transposase IS3 VFG0785 Protein 9e-29 41