Gene Information

Name : CFSAN002050_22010 (CFSAN002050_22010)
Accession : YP_008262269.1
Strain : Salmonella enterica CFSAN002050
Genome accession: NC_021818
Putative virulence/resistance : Unknown
Product : transposase IS1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4226652 - 4227203 bp
Length : 552 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGCCGGGCAACCGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTCCGCCATTTAAAAAACTCAGGCCGCAGTCGGT
AACCTCGCGCATACAGCCGGGCAGTGACGTCATCGTCTGCGCGGAAATGGACGAACAGTGGGGATACGTCGGGGCTAAAT
CGCGCCAGCGCTGGCTGTTTTACGCGTATGACAGGCTCCGGAAGACGGTTGTTGCGCACGTATTCGGTGAACGCACTATG
GCGACGCTGGGGCGTCTTATGAGCCTGCTGTCACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGA
ATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGC
AGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTAT
GGAAGGTGCGAACAAGTTCCTGATATGAGATCATCATATTCATCCGGAGCGCATCCCAGAGGGACATCATGA

Protein sequence : 
MPGNRPHYGRWPQHDFPPFKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTM
ATLGRLMSLLSPFDVVIWMTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHY
GRCEQVPDMRSSYSSGAHPRGTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EC042_4085 YP_006098368.1 transposase Not tested Tn2411 Protein 1e-74 100
EC042_4113 YP_006098397.1 transposase Not tested Tn2411 Protein 1e-74 100
insB NP_458736.1 insertion element IS1 protein InsB Not tested SPI-7 Protein 1e-74 100
InsB (Tn1) CAJ77072.1 Transposase Not tested AbaR1 Protein 5e-75 100
insB ADD91744.1 transposase Not tested PAI-I AL862 Protein 3e-73 97
Z1632 NP_287135.1 IS1 protein InsB Not tested TAI Protein 8e-68 90
Z1192 NP_286727.1 IS1 protein InsB Not tested TAI Protein 8e-68 90
tnpH AAD44742.1 TnpH Not tested SHI-2 Protein 3e-67 89
S4059 NP_839227.1 IS1 orfB Not tested SHI-2 Protein 4e-67 89
aec38 AAW51721.1 InsB Not tested AGI-3 Protein 7e-56 88
insB NP_709451.1 IS1 ORF2 Not tested SHI-2 Protein 2e-65 87

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002050_22010 YP_008262269.1 transposase IS1 VFG0612 Protein 6e-66 87