|
Name : spaM (CFSAN002050_20765) Accession : YP_008262024.1 Strain : Salmonella enterica CFSAN002050 Genome accession: NC_021818 Putative virulence/resistance : Virulence Product : type III secretion system protein SpaM Function : - COG functional category : - COG ID : - EC number : - Position : 3967110 - 3967553 bp Length : 444 bp Strand : - Note : involved in a secretory pathway responsible for the surface presentation of determinants needed for the entry of Salmonella species into mammalian cells; Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGCATTCGCTGACCAGAATTAAAGTATTGCAGCGGCGCTGTACGGTATTTCATTCACAGTGTGAGTCGATATTACTTCG CTATCAGGATGAGGACCGCGGGCTGCAGGCCGAGGAGGAGGCGCTCCTTGAACAAATAGCGGGTCTGAAATTGTTATTAG ATACGCTGCGTGCAGAAAACAGACAGCTCAGTCGTGAGGAAATTTATACGTTATTACGTAAGCAGTCTATTGTTCGCCGG CAGATAAAAGATTTAGAACTCCAGATTATACAAATTCAGGAAAAACGGAGCGAGCTGGAAAAGAAAAGGGAAGAGTTTCA GAAAAAAAGTAAATATTGGTTGCGCAAAGAAGGGAACTATCAACGCTGGATAATCCGTCAGAAAAGACACTATATCCAGC GAGAGATACAGCAGGAAGAGGCCGAGTCAGAGGAGATAATTTAA Protein sequence : MHSLTRIKVLQRRCTVFHSQCESILLRYQDEDRGLQAEEEALLEQIAGLKLLLDTLRAENRQLSREEIYTLLRKQSIVRR QIKDLELQIIQIQEKRSELEKKREEFQKKSKYWLRKEGNYQRWIIRQKRHYIQREIQQEEAESEEII |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| invI | YP_217812.1 | surface presentation of antigens; secretory proteins | Virulence | SPI-1 | Protein | 1e-39 | 99 |
| invI | NP_461814.1 | needle complex assembly protein | Virulence | SPI-1 | Protein | 1e-39 | 99 |
| spaM | NP_457287.1 | secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 1e-40 | 99 |
| spaM | NP_806496.1 | virulence-associated secretory protein | Virulence | SPI-1 | Protein | 1e-40 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| spaM | YP_008262024.1 | type III secretion system protein SpaM | VFG0554 | Protein | 3e-40 | 99 |
