Gene Information

Name : CFSAN002050_20695 (CFSAN002050_20695)
Accession : YP_008262010.1
Strain : Salmonella enterica CFSAN002050
Genome accession: NC_021818
Putative virulence/resistance : Virulence
Product : chaperone protein SicP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3954543 - 3954935 bp
Length : 393 bp
Strand : -
Note : type III secretion system chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
TTGCAAGCACACCAGGATATTATCGCTAATATTGGTGAGAAATTGGGTTTACCGCTCACTTTTGACGACAACAATCAGTG
CTTATTACTACTCGATAGCGATATTTTTACGTCTATTGAAGCTAAAGATGATATCTGGTTATTGAACGGTATGATTATAC
CGTTATCGCCTGTTTGTGGCGATTCTATCTGGCGGCAGATTATGGTGATTAATGGTGAACTGGCTGCGAATAATGAAGGT
ACGTTAGCGTATATTGATGCTGCAGAGACGTTGTTGTTTATACATGCAATTACCGATCTGACAAATACTTACCATATTAT
ATCGCAGCTTGAGTCATTTGTGAATCAGCAGGAAGCGCTCAAAAACATACTGCAGGAATATGCTAAAGTATGA

Protein sequence :
MQAHQDIIANIGEKLGLPLTFDDNNQCLLLLDSDIFTSIEAKDDIWLLNGMIIPLSPVCGDSIWRQIMVINGELAANNEG
TLAYIDAAETLLFIHAITDLTNTYHIISQLESFVNQQEALKNILQEYAKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sicP NP_461800.1 secretion chaperone Virulence SPI-1 Protein 9e-54 99
sicP YP_217798.1 virulence associated chaperone Virulence SPI-1 Protein 5e-48 99
sicP NP_457273.1 chaperone (associated with virulence) Virulence SPI-1 Protein 3e-47 98
sicP NP_806482.1 chaperone Virulence SPI-1 Protein 3e-47 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002050_20695 YP_008262010.1 chaperone protein SicP VFG0541 Protein 3e-54 99