Gene Information

Name : CFSAN002050_20665 (CFSAN002050_20665)
Accession : YP_008262004.1
Strain : Salmonella enterica CFSAN002050
Genome accession: NC_021818
Putative virulence/resistance : Virulence
Product : type III secretion system needle complex protein PrgI
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3946930 - 3947172 bp
Length : 243 bp
Strand : -
Note : with InvG, PrgH, and Prg K makes up the membrane spanning needle complex; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :

ATGGCAACACCTTGGTCAGGCTATCTGGATGACGTCTCAGCAAAATTTGATACGGGCGTTCAGGATCTACAAACGCAGGT
AACAGATGCGCTGGATAAATTAGCAGCAAAACCCTCCGATCCGGCGCTACTGGCGGCGTATCAGAGTAAGCTCTCGGAAT
ATAACTTGTACCGTAACGCGCAATCGAACACGGTAAAAGTCTTTAAGGATATTGATGCTGCCATTATTCAGAACTTCCGT
TAA

Protein sequence :

MATPWSGYLDDVSAKFDTGVQDLQTQVTDALDKLAAKPSDPALLAAYQSKLSEYNLYRNAQSNTVKVFKDIDAAIIQNFR

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
prgI	YP_217792.1	cell invasion protein	Virulence	SPI-1	Protein	3e-30	97
prgI	NP_461794.1	needle complex major subunit	Virulence	SPI-1	Protein	3e-30	97
prgI	AAX49613.1	PrgI	Virulence	SPI-1	Protein	2e-30	97
prgI	NP_806476.1	pathogenicity island 1 effector protein	Virulence	SPI-1	Protein	3e-29	92
prgI	NP_457267.1	pathogenicity 1 island effector protein	Virulence	SPI-1	Protein	3e-29	92
ECs3718	NP_311745.1	EprI	Not tested	LIM	Protein	7e-20	63
ysaG	AAS66835.1	YsaG	Not tested	SSR-1	Protein	5e-17	54

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
CFSAN002050_20665	YP_008262004.1	type III secretion system needle complex protein PrgI	VFG0535	Protein	8e-31	97
CFSAN002050_20665	YP_008262004.1	type III secretion system needle complex protein PrgI	VFG0996	Protein	2e-19	70
CFSAN002050_20665	YP_008262004.1	type III secretion system needle complex protein PrgI	VFG2466	Protein	6e-18	58