Gene Information

Name : CFSAN002050_20630 (CFSAN002050_20630)
Accession : YP_008261997.1
Strain : Salmonella enterica CFSAN002050
Genome accession: NC_021818
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3941811 - 3942566 bp
Length : 756 bp
Strand : -
Note : activates Salmonella pathogenicity island 4 genes and weakly represses Salmonella pathogenicity island 1 genes; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGAGAAATGTAATTATATACGGTATTAACTGGACTAATTGTTATGCCCTTCAGTCTATTTTTAAGCAAAAATATCCGGA
AAAGTGCGTTAAAACGTGTAACTCATTAACCGCACTTTTGCATTCTCTATCCGATATGCCGGACGCCGGGCTGATTTTAG
CTTTGAACCCGCATGAGCATGTTTATCTTTTTCATGCGTTGCAGACGCGGTTGCAGAACCGTAAAGTTTTGGTAGTGGCA
GATCGCTTGTATTATATCGATCGCTGTGTGCTGCAATATTTTGGCGTTATGGATTATGTTTTAAAAGACGAACTATCCTG
CGCTATCCGCTCGGATCGAGAGAAGCTACGTCTTCCGGAAGCCTGGCTGCGTTTCTGCCACAGGCCACAAAAGAAAACCG
TGGCTGCTACGTATGCTTTTAATGCCGGCGAGACGCCGGAAGAGGTATTGTTTAATATCAATCAATACGCCTGGTGGAAT
CTACCTCCCGGCGTCACTCAGGCGAAATATGCGCTGCTGATATTATTATCCTCCGGACATCCGGCAATTGAACTGGCGAA
AAAATTTGGTCTGGGAACAAAAACCGTCAGTATTTATCGTAAGAAGGTTATGTATCGTTTGGGGATGGACTCTTCACCGC
TATCGCTGTTCCGGGGACTGAAACTAGACGCGCATTTACAGCGCACTGCTTTTGCACATAACCCTGCTGTACCTGACGAT
AATTGCGCGTTACCGATTGCGGTAGGAATGAATTAA

Protein sequence :
MRNVIIYGINWTNCYALQSIFKQKYPEKCVKTCNSLTALLHSLSDMPDAGLILALNPHEHVYLFHALQTRLQNRKVLVVA
DRLYYIDRCVLQYFGVMDYVLKDELSCAIRSDREKLRLPEAWLRFCHRPQKKTVAATYAFNAGETPEEVLFNINQYAWWN
LPPGVTQAKYALLILLSSGHPAIELAKKFGLGTKTVSIYRKKVMYRLGMDSSPLSLFRGLKLDAHLQRTAFAHNPAVPDD
NCALPIAVGMN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sprB NP_806469.1 AraC family transcriptional regulator Virulence SPI-1 Protein 6e-117 99
sprB AAD37785.1 transcriptional regulator SprB Virulence SPI-1 Protein 2e-116 99
sprB YP_217785.1 transcriptional regulator Virulence SPI-1 Protein 2e-116 99
sprB NP_461787.1 transcriptional regulator Virulence SPI-1 Protein 2e-116 99
sprB NP_457260.1 possible AraC-family transcriptional regulator Virulence SPI-1 Protein 6e-117 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002050_20630 YP_008261997.1 transcriptional regulator VFG0530 Protein 1e-116 99