Gene Information

Name : CFSAN002050_20610 (CFSAN002050_20610)
Accession : YP_008261993.1
Strain : Salmonella enterica CFSAN002050
Genome accession: NC_021818
Putative virulence/resistance : Virulence
Product : manganese transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3938126 - 3938947 bp
Length : 822 bp
Strand : +
Note : with SitACD is involved in the transport of manganese and iron; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGAGTCAATCTGCGATTACCGTTGATCAAGTCACGGTGACGTATCGCAACGGTCATACCGCCCTACGGGACGCCACTTT
TCAGGTGCCTGGCGGTTCAATCGCCGCGCTGGTAGGCGTAAATGGTTCCGGTAAGTCTACGTTATTTAAAGCGTTAATGG
GCTTTGTGCATCTTGCGCAGGGCGATATCACTATCCTGCAACAGTCAGTCAACAAGGCGCTGAAAAAAAACCTCATTGCT
TATGTTCCGCAATCGGAAGAAGTGGACTGGTCATTTCCGGTGCTGGTAGAAGATGTGGTGATGATGGGGCGCTACGGCCA
TATGGGCTGGCTACGCCGTCCCACTGCGCATGATCACGCCTGTGTTGACGCCGCGCTGGCGCGGGTGGATATGCAGGAAT
ATCGTCACAGGCAGATTGGCGAGCTGTCCGGCGGGCAGAAAAAACGTGTGTTTCTTGCCAGGGCCATCGCTCAGGATGGA
CAGGTAATCCTGCTGGATGAACCTTTTACCGGCGTGGATGTAAAAACCGAAGCGCGAATCATCGATCTACTGCGGGAACT
GCGCGATGAAGGCCGCACGATGCTGGTCTCAACGCATAATCTCGGCTCCGTCACCGAGTTTTGCGACTATACGGTAATGA
TTAAAGGAACCGTACTGGCCAGCGGCCCTACCGAAACCACGTTTACCGCCGCGAATCTGGAACAGGCGTTTAGCGGCGTT
CTACGTCATATCGCGCTAAGCGGAGGCGAAGAGCACATCATCACCGATGACGAGCGCCCCTTTATTTCCCGGCGCGTGAC
CAGCGGAGGAAAATCGTCATGA

Protein sequence :
MSQSAITVDQVTVTYRNGHTALRDATFQVPGGSIAALVGVNGSGKSTLFKALMGFVHLAQGDITILQQSVNKALKKNLIA
YVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRPTAHDHACVDAALARVDMQEYRHRQIGELSGGQKKRVFLARAIAQDG
QVILLDEPFTGVDVKTEARIIDLLRELRDEGRTMLVSTHNLGSVTEFCDYTVMIKGTVLASGPTETTFTAANLEQAFSGV
LRHIALSGGEEHIITDDERPFISRRVTSGGKSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-127 99
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 7e-128 99
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 5e-128 99
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 3e-126 99
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 3e-126 99

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002050_20610 YP_008261993.1 manganese transporter BAC0350 Protein 3e-128 99
CFSAN002050_20610 YP_008261993.1 manganese transporter BAC0440 Protein 6e-80 63
CFSAN002050_20610 YP_008261993.1 manganese transporter BAC0400 Protein 4e-49 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002050_20610 YP_008261993.1 manganese transporter VFG0526 Protein 3e-128 99