Gene Information

Name : CFSAN002050_20145 (CFSAN002050_20145)
Accession : YP_008261906.1
Strain : Salmonella enterica CFSAN002050
Genome accession: NC_021818
Putative virulence/resistance : Unknown
Product : transposase IS3
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3845595 - 3846407 bp
Length : 813 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
GTGCTGGATGTTCATCCCAGTGGCTTTTACGCCTGGCTTCAGCAGCCGCATTCACAGCGAGAGCAGGCGAACCAGATGCT
GACCGGGCAGATCAAACAGTTCTGGCTTGAGTCAGGCTGCGTCTATGGTTATCGCAAGATCCACCTCGATCTGCGTGACA
CCGGGCAGCAGTGTGGGGTGAACCGTGTCTGGCGGCTGATGAAGCGGGCCGGCATAAAGGCTCAGGTCGGATACCGGAGC
CCGCGGGCACGCAAAGGTGAAGACAGTCTCGTGGCGCCTGACCGACTCCAGCGGCAGTTTAATCCGGATGCTCCCGATGA
ACGTTGGGTAACGGACATAACCTACATCCGAACCCACGAAGGCTGGCTGTATCTGGCCGTGGTTGTTGATCTGTTCTCCC
GGAAAGTTATCGGCTGGTCAATGCAGCCCCGGATGACCAAAGAGATCGTCCTGAATGCGCTTTTGATGGCCTTGTGGCGG
CGTAATCCGCAAAAGGCGGTGCTGGTTCACGCTGACCAGGGCAGTCAATATACAAGCTATGAATGGCAGTCGTTTTTGAA
ATCACACGGCCTGGAAGGCAGTATGAGTCGTCGTGGTAACTGCCACGATAATGCGGTCGCAGAAAGCTTTTTTCAGCTAC
TAAAACGTGAACGGATAAAGAAAAAGATCTACGGAACGCGGGAAGAAGCCCGCAGCGATATTTTTGATTACATCGAAATG
TTTTATAACAGTAAGCGTCGGCATGGTTCGAGCGATAAGATGCCACCGACAGAATATGAAAACCGATATTACCGACGACT
CGAAAGTGTCTAG

Protein sequence :
MLDVHPSGFYAWLQQPHSQREQANQMLTGQIKQFWLESGCVYGYRKIHLDLRDTGQQCGVNRVWRLMKRAGIKAQVGYRS
PRARKGEDSLVAPDRLQRQFNPDAPDERWVTDITYIRTHEGWLYLAVVVDLFSRKVIGWSMQPRMTKEIVLNALLMALWR
RNPQKAVLVHADQGSQYTSYEWQSFLKSHGLEGSMSRRGNCHDNAVAESFFQLLKRERIKKKIYGTREEARSDIFDYIEM
FYNSKRRHGSSDKMPPTEYENRYYRRLESV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 3e-41 45
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 1e-41 45
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 7e-41 45
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 4e-42 43
tnpB CAB61574.1 transposase B Not tested HPI Protein 6e-43 43
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 1e-29 41
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 1e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002050_20145 YP_008261906.1 transposase IS3 VFG1484 Protein 7e-30 41