Gene Information

Name : CFSAN002050_18920 (CFSAN002050_18920)
Accession : YP_008261675.1
Strain : Salmonella enterica CFSAN002050
Genome accession: NC_021818
Putative virulence/resistance : Unknown
Product : ABC transporter substrate-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3562403 - 3563596 bp
Length : 1194 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGTTCGGTTCTTGCCAGGCGTACAGCCGCGAGCTGGTGATGGCAACGACCTTTTCACCCAGCGCGACCGCCTGGATTAT
CCAGCGCTGGCAGACGGAGCCGGGTTCCGTCATGATTCGTACGCTCAACCGTACCAGCGGTTCTTTAGAGCAATTACTTG
ATACGGCGAATGCGGAAAATGTCGATCTGATCCTGACGTCATCCCCCATGCTGTTGCAACACCTTCAGGAGCACCAAAAG
CTGGCGCTATTGGATAGCGCGCCTGCCGCCAGCCAGAAGCTGGTGCCGCGTTCTATCCGCTCAACTTCAGTGGCGGTAGC
GGTATCCGGATTTGGGCTATTGATCAACCGTTCAGCGCTCGCTGCGCGCCATCTTCCGCCGCCTGCCGACTGGCAGGATA
TGGGCCTGCCCAGTTACCAGGGCGCTCTATTAATGAGCAGTCCGTCACGCTCAGACACGAATCATTTGATGGTGGAGTCG
CTGTTGCAGCAAAAAGGCTGGACGGCAGGATGGGCAACGCTGCTGGCAATCTCGGGTAATCTGGTCACGATTTCCTCTCG
CAGTTTCGGCGTAGCGGATAAAATTAAAAGCGGGCTTGGCGTTGCCGGGCCGGTCATTGATAACTATGCTAATTTGCTAC
TTAACGATCCTAATCTTGCTTTTACCTATTTCCCATATTCTGCGGTGTCGCCCACTTACGTCGCGGTGTTGAAAAACAGC
CGTCATGCAGACGAAGCGCGTGCTTTTATTCATTACTTATTAAGTCCGAAAGGGCAAAGGATACTGGCTGACGCGAATAC
CGGTAAGTATCCCGTCGCACCGCTTAGCGCCGATAATCCTCGCGCCGCGCAACAACAGCGTTTGATGGCCCAGCCGCCGT
TGAACTATCGTCTGATCCTGAAGCGTCAGCAACTGGTACAACGCATGTTTGATACCGCGATCAGTTTTCGTCTCGCGCAG
CTTAAAGATGCATGGCGAGCGTTGCACAGCGCAGAAACGCGGCTTAAACGCCCCTTACCTGAAATCAGAGCCTTATTGAC
CAGCGTCCCGGTGGATGCGGCAAGCAGCGAAGATGAAACCTGGCTGGCGCAGTTTGATAATAAAAGCTTTGCCGAACAAA
AAATGATGGAGTGGCAGATCTGGTTTCTGAACAATCAGCGGCTGGCGATTCACAAACTGGAAGAGCTGAAATGA

Protein sequence :
MFGSCQAYSRELVMATTFSPSATAWIIQRWQTEPGSVMIRTLNRTSGSLEQLLDTANAENVDLILTSSPMLLQHLQEHQK
LALLDSAPAASQKLVPRSIRSTSVAVAVSGFGLLINRSALAARHLPPPADWQDMGLPSYQGALLMSSPSRSDTNHLMVES
LLQQKGWTAGWATLLAISGNLVTISSRSFGVADKIKSGLGVAGPVIDNYANLLLNDPNLAFTYFPYSAVSPTYVAVLKNS
RHADEARAFIHYLLSPKGQRILADANTGKYPVAPLSADNPRAAQQQRLMAQPPLNYRLILKRQQLVQRMFDTAISFRLAQ
LKDAWRALHSAETRLKRPLPEIRALLTSVPVDAASSEDETWLAQFDNKSFAEQKMMEWQIWFLNNQRLAIHKLEELK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pgtC CAE85167.1 PgtC protein Not tested PAI V 536 Protein 5e-156 85
pgtC YP_854266.1 phosphoglycerate transport regulatory protein Not tested PAI I APEC-O1 Protein 8e-156 84
pgtC AAZ04435.1 phosphoglycerate transport regulatory protein Not tested PAI I APEC-O1 Protein 6e-156 84
pgtC NP_757050.1 regulatory protein Not tested PAI II CFT073 Protein 7e-155 84