Gene Information

Name : CFSAN002050_18655 (CFSAN002050_18655)
Accession : YP_008261623.1
Strain : Salmonella enterica CFSAN002050
Genome accession: NC_021818
Putative virulence/resistance : Virulence
Product : LacI family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3509678 - 3510697 bp
Length : 1020 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGTCGATACCCCGTAAACGGCGCAGTACCGGTAAAGTGACTATCGCCGATGTAGCCCAACTTGCCGGTGTAGGCACGAT
GACCGTATCACGAGCCTTACGCACGCCGGAACAGGTCTCTGATAAACTCCGGGAAAAAATCGAAGCGGCAGTGCATGAGC
TGGGCTATATGCCTAATCTCGCCGCCAGCGCGCTGGCGTCTGCCTCCTCGCACACCATCGCAATGGTCGTACCGAACCTT
GCGGAAGCGGGGTGTTCTGAAATGTTCGCCGGGCTGCAACAAATTTTACAGCCCGCTGGCTACCAGATTATGCTGGCGGA
ATCGCAGCATCGCGTGGAACAAGAGGAGAAGCTGCTCGAAACGCTGCTGGCCTCCAACATTGCCGCGGCGATTCTGCTTA
GCGTCGAACATAGCACTACCGTGCGCCAGTGGCTGAAAAATGCCTCTATCCCGGTGATGGAGATGGGCGCGATTCGCAGC
GATCCTATTGATATGAATATCGGTATTGATAACGTTGCGGCAATGTATGAGCTGACGGAAATGCTGATTCAGCGCGGTTA
TCAGAATATCGGGCTGCTATGCGCCAATCAGGAACAGTGGATTTTTCAGCAACATCTGCACGGCTGGTACAAAGCGATGC
TTCGCCACCATATGTCGCCAAACCGGGTGATTAATGCCGCTTTGCCGCCCAATTTTTCTACCGGCGCGTCGCAACTGCCG
GAGTTTTTACTGGCGTGGCCGGAGCTGGACGCGCTGGTATGCGTATCGGATGAGCTGGCCTGCGGCGCGTTATACGAGTG
CCAACGACGGCGGATCAAAGTTCCGGACGATTTAGCGGTGGTCGGGTTTGGCGATAGCGATGTCAGCCGGGTCTGCCAGC
CGCCGTTAACCACCATGGCCGTACCGCACCGTAAGATTGGCAGTGAAGCCGGACGGGCGCTGTTGGAAAGGTTAAATCAG
GGAAACTGGAGCGATCGAAAATCCATCGCCTCCAGTTTATGTATGCGGGAAAGCTGCTAA

Protein sequence :
MSIPRKRRSTGKVTIADVAQLAGVGTMTVSRALRTPEQVSDKLREKIEAAVHELGYMPNLAASALASASSHTIAMVVPNL
AEAGCSEMFAGLQQILQPAGYQIMLAESQHRVEQEEKLLETLLASNIAAAILLSVEHSTTVRQWLKNASIPVMEMGAIRS
DPIDMNIGIDNVAAMYELTEMLIQRGYQNIGLLCANQEQWIFQQHLHGWYKAMLRHHMSPNRVINAALPPNFSTGASQLP
EFLLAWPELDALVCVSDELACGALYECQRRRIKVPDDLAVVGFGDSDVSRVCQPPLTTMAVPHRKIGSEAGRALLERLNQ
GNWSDRKSIASSLCMRESC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vpeR ADD91728.1 putative transcriptional regulatory protein VpeR Virulence PAI-I AL862 Protein 9e-55 43
unnamed CAC39290.1 hypothetical protein Not tested LPA Protein 3e-53 42