Gene Information

Name : CFSAN002050_01705 (CFSAN002050_01705)
Accession : YP_008258329.1
Strain : Salmonella enterica CFSAN002050
Genome accession: NC_021818
Putative virulence/resistance : Virulence
Product : membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 35033 - 35512 bp
Length : 480 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGAATAATCGTCGTGGTTTAACCGCCGTCCTGGCGACGTTGATTACGTTTTCCCTGAGCGCTACGCCTGTGCTGGCGAA
TCCGGGAAATGGCAATGGCGGCGGACATGGTAATAACGCGGCTAATCAGGGTAATAACGGTAACGGACATAAAGGAAATG
CCGGGCAAAAAACGGAACACCGTAAAAATGGCGGCAAACCGGATCACGTCGAGTCGGACATTAGCTACGTTGTCGCCAGG
CAACTGGCAGTGAATTTAGGGCTGACGGGTTATCAGTCTTTACCTCCGGGGATTGCGAAAAATCTGGCGAGAGGAAAACC
GCTGCCGCCGGGAATCGCTAAAAAAACGGTGCCGGCGTCTATGCTGGGACAATTACCTTATTATCCGGGCTATGAGTGGA
AAATCGTTGGGGATAATCTGGTGCTGATCGCGCTCAGTACCGCGGTGGTCACGGCGATTATTAATGGCGTATTTGATTAA

Protein sequence :
MNNRRGLTAVLATLITFSLSATPVLANPGNGNGGGHGNNAANQGNNGNGHKGNAGQKTEHRKNGGKPDHVESDISYVVAR
QLAVNLGLTGYQSLPPGIAKNLARGKPLPPGIAKKTVPASMLGQLPYYPGYEWKIVGDNLVLIALSTAVVTAIINGVFD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cigR NP_462661.1 inner membrane protein Virulence SPI-3 Protein 3e-50 99
cigR AAD16958.1 CigR Virulence SPI-3 Protein 2e-50 99
cigR YP_218670.1 inner membrane protein Not tested SPI-3 Protein 2e-49 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002050_01705 YP_008258329.1 membrane protein VFG0573 Protein 7e-51 99