Gene Information

Name : CFSAN002050_17800 (CFSAN002050_17800)
Accession : YP_008261455.1
Strain : Salmonella enterica CFSAN002050
Genome accession: NC_021818
Putative virulence/resistance : Virulence
Product : MerR family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3311450 - 3312181 bp
Length : 732 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGGCGCTTTACACAATTGGTGAAGTGGCTTTGCTTTGTGATATCAATCCTGTCACGTTGCGCGCGTGGCAGAGACGTTA
TGGACTTTTAAAACCACAGCGAACGGATGGCGGTCATCGTCTGTTTAACGATGCCGATATCGACAGAATCCGCGAAATCA
AGCGCTGGATAGATAACGGCGTCCAGGTCAGCAAAGTCAAAGTGCTGCTCAGTAGCGACAGTAGCGAACAACCTAACGGC
TGGCGCGAACAGCAGGAGATCCTGCTGCACTATCTGCAAAGCAGTAATCTGCACAGTTTACGGTTATGGGTCAAAGAACG
CGGTCAGGATTATCCAGCCCAAACATTGACCACTAACCTGTTCGTCCCGCTGCGGCGACGATTACAGTGCCAACAACCCG
CCCTTCAGGCGCTGCTCGGCATTCTTGACGGTATCCTGATCAACTATATTGCGCTCTGCCTGGCGTCTGCGCGTAAGAAA
CAGGGAAAAGATGCGTTGGTGATCGGCTGGAATATCCATGATACCACCCGCCTGTGGCTGGAAGGTTGGGTCGCCAGCCA
ACAGGGATGGCGAATCGACGTGTTGGCGCATTCGCTTAGCCAGTTCCGCCCGGAACTGTTTGACGGCAAGACGTTACTGG
TATGGTGCGGAGAAAACCAGACGCTGGCGCAGCAGCAGCAACTCCTGGCATGGCGCGCCCAGGGACGCGACATTCATCCC
CTTGGCGTTTAA

Protein sequence : 
MALYTIGEVALLCDINPVTLRAWQRRYGLLKPQRTDGGHRLFNDADIDRIREIKRWIDNGVQVSKVKVLLSSDSSEQPNG
WREQQEILLHYLQSSNLHSLRLWVKERGQDYPAQTLTTNLFVPLRRRLQCQQPALQALLGILDGILINYIALCLASARKK
QGKDALVIGWNIHDTTRLWLEGWVASQQGWRIDVLAHSLSQFRPELFDGKTLLVWCGENQTLAQQQQLLAWRAQGRDIHP
LGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF 242 CAB37409.1 - Not tested SPI-2 Protein 4e-34 45
orf242 NP_460355.1 regulatory protein Not tested SPI-2 Protein 6e-34 45
STY1730 NP_456138.1 putative transcriptional regulator Not tested SPI-2 Protein 3e-34 44
t1258 NP_805061.1 transcriptional regulator Not tested SPI-2 Protein 3e-34 44
SC1411 YP_216398.1 MerR family transcriptional regulator Not tested SPI-2 Protein 8e-34 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002050_17800 YP_008261455.1 MerR family transcriptional regulator VFG0491 Protein 2e-34 45