Gene Information

Name : CFSAN002050_01695 (CFSAN002050_01695)
Accession : YP_008258327.1
Strain : Salmonella enterica CFSAN002050
Genome accession: NC_021818
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 32484 - 33341 bp
Length : 858 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGTCCTGCTACGCAGCCACAGCATCAGACTATACTCAGTGGTGTCTATTAACCCTCTCCAACTACGTTATGTTTTGGCA
TGGTAACAATGCGATGTTATGGATAATTAACGATAATATTGAATTTAATCCAGAAATGAATCGCCTGGCGTCATTATCGA
GGCCAGATCTCAACATTATTCTGACAACGCCCGCCAGCCGCTGCTTGCGCCTTCTGCTGGAAAACGCCCCCTCCGTCGTC
TCACAACAAACATTCTTTCAAAAAGTGTGGGAAGAAGACGGCATGGTGGTGTCGGCAAATACGCTTTATCAGAATATCTC
CATTATTCGCCGCGGATTACGTACCGTTGGCGAAAATGAAGATACGCTGATAATCACGGTTCCGCGTAGAGGCTTTCAGA
TTGAGCCTGGTGTGAGCATCATGACCATCCGCAAAGACTTCGCTCAGGCAATAGAAAAAAAGGGTGAGACGCCGCCGCGT
ACGTCAGGGCGTTGGTTTAAACATTATGTACCTGTACTTTGGATGACCGGGACATTTGCTGTCGGTATTTTGCTTGGCAC
TATCAGCTGGCAAACCGTTCCCGATAAGGATTTTTACGATCGCTACACGCTGGTTGAAACAACTCAGGGCTGTCATTTTT
TCTCGCGGAATGAAGATATCGAAAGCGGTAGCCGCTTTGCAAGCTATAAGTCAATGATTCTAAAAACCGGTATGGATTGT
CAGAAATACCCATGGGTCTATTTCCCTTCCAGCAGTCGCACCCCAGCGGTTACGGCATTGATTTGTCAGCAACCTTATAA
AACGCGCGGTGATACAGGCTGCGTGACGCTTTTTTTCCGCGGGGTGACACATGGGTAA

Protein sequence :
MSCYAATASDYTQWCLLTLSNYVMFWHGNNAMLWIINDNIEFNPEMNRLASLSRPDLNIILTTPASRCLRLLLENAPSVV
SQQTFFQKVWEEDGMVVSANTLYQNISIIRRGLRTVGENEDTLIITVPRRGFQIEPGVSIMTIRKDFAQAIEKKGETPPR
TSGRWFKHYVPVLWMTGTFAVGILLGTISWQTVPDKDFYDRYTLVETTQGCHFFSRNEDIESGSRFASYKSMILKTGMDC
QKYPWVYFPSSSRTPAVTALICQQPYKTRGDTGCVTLFFRGVTHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
marT NP_462658.3 transcriptional regulator Not tested SPI-3 Protein 2e-117 99
marT YP_218667.1 transcriptional regulatory protein Not tested SPI-3 Protein 1e-132 99
marT AAD16956.1 putative transcriptional regulator MarT Virulence SPI-3 Protein 1e-132 99
ECs3704 NP_311731.1 sensory transducer Not tested LIM Protein 1e-53 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002050_01695 YP_008258327.1 transcriptional regulator VFG0570 Protein 1e-117 99