Gene Information

Name : CFSAN002050_13480 (CFSAN002050_13480)
Accession : YP_008260607.1
Strain : Salmonella enterica CFSAN002050
Genome accession: NC_021818
Putative virulence/resistance : Virulence
Product : type III secretion system protein SsaP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2458578 - 2458952 bp
Length : 375 bp
Strand : +
Note : Salmonella pathogenicity island 2 protein; member of a type III secretion system involved in the survival and replication of Salmonella in a host cell; Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGCGTATTACCAAAGTTGAGGGAAGTCTTGGGTTGCCATGCCAGTCTTATCAGGATGATAACGAGGCGGAGGCGGAACG
TATGGACTTTGAACAACTCATGCACCAGGCATTACCCATTGGTGAGAATAATCCTCCTGCAGCATTGAATAAGAACGTGG
TTTTCACGCAACGTTATCGTGTTAGTGGCGGTTATCTTGACGGTGTAGAGTGTGAAGTATGTGAATCAGGGGGGCTAATC
CAGTTAAGAATCAATGTCCCTCATCATGAAATTTACCGTTCGATGAAAGCGCTAAAGCAGTGGCTGGAGTCTCAGTTGTT
GCATATGGGGTATATAATTTCCCTGGAGATATTCTATGTTAAGAATAGCGAATGA

Protein sequence : 
MRITKVEGSLGLPCQSYQDDNEAEAERMDFEQLMHQALPIGENNPPAALNKNVVFTQRYRVSGGYLDGVECEVCESGGLI
QLRINVPHHEIYRSMKALKQWLESQLLHMGYIISLEIFYVKNSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaP NP_456111.1 putative type III secretion protein Virulence SPI-2 Protein 4e-55 100
ssaP NP_805088.1 type III secretion protein Virulence SPI-2 Protein 4e-55 100
ssaP NP_460382.1 type III secretion system apparatus protein Virulence SPI-2 Protein 4e-55 100
ssaP AAX49619.1 SsaP Virulence SPI-2 Protein 2e-45 100
ssaP CAA70539.1 secretion system apparatus Virulence SPI-2 Protein 3e-55 100
ssaP YP_216425.1 secretion system apparatus protein SsaP Virulence SPI-2 Protein 1e-54 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002050_13480 YP_008260607.1 type III secretion system protein SsaP VFG0517 Protein 1e-55 100