Gene Information

Name : CFSAN002050_13450 (CFSAN002050_13450)
Accession : YP_008260601.1
Strain : Salmonella enterica CFSAN002050
Genome accession: NC_021818
Putative virulence/resistance : Virulence
Product : type III secretion system protein SsaK
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2452814 - 2453488 bp
Length : 675 bp
Strand : +
Note : Salmonella pathogenicity island 2 protein; member of a type III secretion system involved in the survival and replication of Salmonella in a host cell; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGAGTTTTACTTCACTTCCTCTGACGGAAATTAACCATAAGCTACCCGCTCGAAATATTATTGAGTCACCGTGGATAAC
ATTACAATTAACTTTATTTGCACAAGAGCAACAAGCTAAGAGCGTTTCACATGCTATTGTGAGCTCCGCTTACCGTAAGG
CTGAAAAAATCATCCGAGACGCCTATCGTTATCAGCGTGAACAGAAAGTTGAGCAGCAACAAGAAATAGCGTGGTTGCGT
AAAAATACGCTGGAAAAAATGGAAGTAGAATGGCTGGAACAACATGTAAAACATTTACAAGAAGATGAAAATCAATTTCG
TTCATTGGTCGATCACGCCGCGCATCATATTAAAAATAGTATAGAACAGGTTCTGTTGGCCTGGTTCGACCAACAGTCGG
TAGACAGTGTTATGTGCCATCGTCTGGCACGCCAGGCCACGGCTATGGCGGAAGAGGGAGCGCTTTATTTGCGTATTCAT
CCTGAAAAAGAGGCATTGATGCGCGAAACTTTTGGCAAGCGGTTTACGTTGATTATCGAGCCTGGTTTCTCTCCCGATCA
GGCTGAACTTTCCTCAACACGATATGCCGTTGAGTTTTCACTTTCTCGTCATTTCAACGCGTTACTGAAATGGTTACGTA
ATGGTGAAGATAAAAGAGGTAGCGATGAATATTAA

Protein sequence :
MSFTSLPLTEINHKLPARNIIESPWITLQLTLFAQEQQAKSVSHAIVSSAYRKAEKIIRDAYRYQREQKVEQQQEIAWLR
KNTLEKMEVEWLEQHVKHLQEDENQFRSLVDHAAHHIKNSIEQVLLAWFDQQSVDSVMCHRLARQATAMAEEGALYLRIH
PEKEALMRETFGKRFTLIIEPGFSPDQAELSSTRYAVEFSLSRHFNALLKWLRNGEDKRGSDEY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1709 NP_456117.1 putative pathogenicity island protein Virulence SPI-2 Protein 4e-101 99
t1279 NP_805082.1 pathogenicity island protein Not tested SPI-2 Protein 4e-101 99
ssaK YP_216419.1 secretion system apparatus protein SsaK Virulence SPI-2 Protein 2e-101 99
ssaK NP_460376.1 type III secretion system apparatus protein Virulence SPI-2 Protein 7e-99 98
ssaK CAA70533.1 secretion system apparatus Virulence SPI-2 Protein 1e-97 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002050_13450 YP_008260601.1 type III secretion system protein SsaK VFG0511 Protein 3e-99 98