Gene Information

Name : CFSAN002050_13435 (CFSAN002050_13435)
Accession : YP_008260598.1
Strain : Salmonella enterica CFSAN002050
Genome accession: NC_021818
Putative virulence/resistance : Virulence
Product : type III secretion system protein SsaI
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2451242 - 2451505 bp
Length : 264 bp
Strand : +
Note : Salmonella pathogenicity island 2 protein; member of a type III secretion system involved in the survival and replication of Salmonella in a host cell; Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
TTGAATATTTCTGATATGAGCGTAGTGCCTGTAAGCACTCAATCTTATGTAAAGTCCTCTGCAGAACCGAGCCAGGAGCA
AATTAATTTTTTTGAACAATTGCTGAAAGATGATGCATCCACCAGTAACGCCAGTGCTTTATTACCGCAGGTTATGTTGA
CCAGTCAAATGGATTATATGCAGTTAACGGTAGGCGTCGATTATCTTGCCAGAATATCAGGCGCAGCATCGCAAGCGCTT
AATAAGCTGGATAGCATGACATGA

Protein sequence : 
MNISDMSVVPVSTQSYVKSSAEPSQEQINFFEQLLKDDASTSNASALLPQVMLTSQMDYMQLTVGVDYLARISGAASQAL
NKLDSMT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaI NP_460373.1 type III secretion system apparatus protein Virulence SPI-2 Protein 6e-31 96
ssaI CAA12195.1 SsaI Virulence SPI-2 Protein 4e-31 96
ssaI AAX49622.1 SsaI Virulence SPI-2 Protein 4e-31 96
ssaI NP_456120.1 putative pathogenicity island protein Virulence SPI-2 Protein 7e-30 94
ssaI NP_805079.1 pathogenicity island protein Virulence SPI-2 Protein 7e-30 94
ssaI YP_216416.1 secretion system apparatus protein SsaI Virulence SPI-2 Protein 6e-30 92

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002050_13435 YP_008260598.1 type III secretion system protein SsaI VFG0509 Protein 2e-31 96