Gene Information

Name : CFSAN002050_13430 (CFSAN002050_13430)
Accession : YP_008260597.1
Strain : Salmonella enterica CFSAN002050
Genome accession: NC_021818
Putative virulence/resistance : Virulence
Product : type III secretion system protein SsaH
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2450955 - 2451245 bp
Length : 291 bp
Strand : +
Note : Salmonella pathogenicity island 2 protein; member of a type III secretion system involved in the survival and replication of Salmonella in a host cell; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
GTGGAATCATTGCTAAAATTTGAAGTTATTAGCGACGATGTTCGACGGTTGCTGCTGGAAATCATGTTTGCGGGCGTTAA
CCATAGCCTGATTTCCCAGGTACATGCGATGTTACCAGCGCTAACGGTTATTGTTCCGGATAAAAAATTACAGTTGGTAT
GTCTGGCATTATTATTGGCGGGTTTAAATGAGCCGCTAAAAGCCGCGAAAATTTTATCGGATATTGATTTGCCAGAGGCT
ATGGCGCTGCGTCTGTTATTTCCTGCACCAAATGAGGGATTTGAAAATTGA

Protein sequence : 
MESLLKFEVISDDVRRLLLEIMFAGVNHSLISQVHAMLPALTVIVPDKKLQLVCLALLLAGLNEPLKAAKILSDIDLPEA
MALRLLFPAPNEGFEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaH AAX49621.1 SsaH Virulence SPI-2 Protein 1e-16 100
ssaH NP_460372.1 type III secretion system apparatus protein Virulence SPI-2 Protein 2e-16 100
ssaH CAA12194.1 SsaH Virulence SPI-2 Protein 1e-16 100
ssaH NP_456121.1 putative pathogenicity island protein Virulence SPI-2 Protein 2e-16 99
ssaH NP_805078.1 pathogenicity island protein Virulence SPI-2 Protein 2e-16 99
ssaH YP_216415.1 secretion system apparatus protein SsaH Virulence SPI-2 Protein 2e-25 99
ssaI AAC28875.1 SsaI Virulence SPI-2 Protein 5e-16 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002050_13430 YP_008260597.1 type III secretion system protein SsaH VFG0508 Protein 4e-17 100