Gene Information

Name : CFSAN002050_13410 (CFSAN002050_13410)
Accession : YP_008260593.1
Strain : Salmonella enterica CFSAN002050
Genome accession: NC_021818
Putative virulence/resistance : Virulence
Product : type III secretion system chaperone protein SscB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2448751 - 2449185 bp
Length : 435 bp
Strand : +
Note : Salmonella pathogenicity island 2 protein; member of a type III secretion system involved in the survival and replication of Salmonella in a host cell; chaperone for SseF; required for the efficient replication of Salmonella in host macrophages; Derived b

DNA sequence : 
ATGATGATGAAAGAAGATCAGAAAAATAAAATACCCGAAGACCTTCTGAAACAGCTATTATCCGTTGATCCGGAAAGCGT
TTATGCCAGTGGTTACGCCTCATGGCAGGAGGGGGATTATTCGCGCGCCGTAATCGATTTTAGCTGGCTGGTGATGGCCC
AGCCATGGAGTTGGCGTGCCCATATTGCATTGGCTGGCACCTGGATGATGCTTAAAGAATACACGACGGCCATTAATTTC
TATGGACATGCCTTGATGCTGGATGCCAGCCATCCAGAACCGGTTTACCAAACGGGCGTCTGTCTCAAAATGATGGGGGA
ACCCGGGTTGGCGAGAGAGGCTTTTCAAACCGCAATCAAGATGAGTTATGCGGATGCCTCATGGAGTGAGATTCGCCAGA
ATGCGCAAATAATGGTTGATACTCTTATTGCTTAA

Protein sequence : 
MMMKEDQKNKIPEDLLKQLLSVDPESVYASGYASWQEGDYSRAVIDFSWLVMAQPWSWRAHIALAGTWMMLKEYTTAINF
YGHALMLDASHPEPVYQTGVCLKMMGEPGLAREAFQTAIKMSYADASWSEIRQNAQIMVDTLIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SC1424 YP_216411.1 secretion system chaperone protein SscB Virulence SPI-2 Protein 1e-62 99
sscB NP_460368.1 secretion system chaperone Virulence SPI-2 Protein 1e-62 99
sscB AAC28884.1 SscB Virulence SPI-2 Protein 1e-62 99
sscB CAA12190.1 SscB Virulence SPI-2 Protein 1e-62 99
sscB NP_456125.1 putative pathogenicity island protein Virulence SPI-2 Protein 5e-62 98
sscB NP_805074.1 pathogenicity island protein Virulence SPI-2 Protein 5e-62 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002050_13410 YP_008260593.1 type III secretion system chaperone protein SscB VFG0504 Protein 4e-63 99