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Name : CFSAN002050_13395 (CFSAN002050_13395) Accession : YP_008260590.1 Strain : Salmonella enterica CFSAN002050 Genome accession: NC_021818 Putative virulence/resistance : Virulence Product : pathogenicity island 2 effector protein SseC Function : - COG functional category : - COG ID : - EC number : - Position : 2446223 - 2447677 bp Length : 1455 bp Strand : + Note : may be involved in the translocation of effector proteins into the host cell; Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGAATCGAATTCACAGTAATAGCGATAGCGCCGCAGGAGTAACCGCCTTAACACATCATCACTTAAGCAATGTCAGTTG CGTTTCCTCGGGTTCGCTGGGAAAGCGCCAGCATCGTGTGAATTCTACTTTTGGCGATGGCAACGCCACGTCTCTGCTAT CAGGGAAAATTAGTCTTCAGGAGGCAAGCAATGCGTTGAAGCAACTGCTTGATGCCGTACCCGGAAATCATAAGCGTCCA TCATTGCCTGACTTTTTGCATATCAATCCCACTGTTTTATCAATGATGATGACGACATTAATACTCAACGTCTTTGGTAA TAACGCTCAATCGTTATGCCAACAGCTTGAGCGGGCAACTGAGGTGCAAAATGCATTACGTAATAAGCAGGTAAAGGAGT ATCAGGAGCAGATCCAGAAAGCGATAGAGCAGGAGGATAAAGCGCGTAAAGCGGGCATTTTTGGCGCTATTTTTGACTGG ATTACCGGCATATTTGAAACTGTGATTGGCGCCTTAAAAGTTGTGGAGGGTTTTCTGTCCGGTAATCCCGCAGAAATGGC TAGCGGCGTAGCTTATATGGCCGCAGGTTGTGCAGGAATGGTTAAAGCCGGAGCCGAAACGGCAATGATGTGCGGTGCTG ACCACGATACCTGTCAGGCGATTATTGTCGTGGCAAGTAAAATTCAAGTTGGTTGTGAAGTCGTCGCGATGGCACTGGAT GTTTTCCAGATTGGTCGTGCTTTTATGGCGACGAGAGGCTTATCTGGCGCAGCTGCAAAAGTGCTTGACTCCGGCTTAGG CGAAGAAATGGTTGAGCGTATGGTAGGTGCAGGGGAAGGAGAAATAGAGGAGTTGGCTGAAAAGTTTGGCGAAGAGGTGA GCGAAAATTTTTCCAAACAATTTGAGGCGATTGAACGTGAAATGGTTTCGCCGGGCGAGATGGAAGAGGAGTCTGCTGAG TTTTCTCGTAAGGTAGAAAATAATATGACGCGAAGCGCGGGAAAAAGTTTTACGAAAGAGGGGGTGAAAGCCATGGCAAA AGAAGCGGCAAAAGAAGCCCTGGAAAAATGTGCGCAGGAAGGGGGAAAGTTTCTGTTAAAAAATTTTCGTAATAAAGTTC TCTGGAATATGTTCAAAAAAATCCTGTATGCCTTACTGAGTGATTGTTCATTTAAAGGCTTACAGGCTATCAGATGTGCA ACCGAGGGCGCCAGTCAGATGAATACTGGCATGGTTAACACAGAAAAAGCGAAGATCGAAAAGAAAATAGAGCAATTAAT AACTCAGCAACGGTTTCTGGATTTCATAATGCAACAAACAGAAAACCAGAAAAAGATAGAACAAAAACGCTTAGAGGAGC TTTATAAGGGGAGCGGTGCCGCGCTTAGAGATGTATTAGATACCATTGATCACTATAGTAGCGTTCAGGCGAGAATAGCT GGCTATCGCGCTTAA Protein sequence : MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNATSLLSGKISLQEASNALKQLLDAVPGNHKRP SLPDFLHINPTVLSMMMTTLILNVFGNNAQSLCQQLERATEVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDW ITGIFETVIGALKVVEGFLSGNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIVVASKIQVGCEVVAMALD VFQIGRAFMATRGLSGAAAKVLDSGLGEEMVERMVGAGEGEIEELAEKFGEEVSENFSKQFEAIEREMVSPGEMEEESAE FSRKVENNMTRSAGKSFTKEGVKAMAKEAAKEALEKCAQEGGKFLLKNFRNKVLWNMFKKILYALLSDCSFKGLQAIRCA TEGASQMNTGMVNTEKAKIEKKIEQLITQQRFLDFIMQQTENQKKIEQKRLEELYKGSGAALRDVLDTIDHYSSVQARIA GYRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sseC | NP_460365.1 | translocation machinery component | Virulence | SPI-2 | Protein | 0.0 | 95 |
| sseC | CAA12187.1 | SseC | Virulence | SPI-2 | Protein | 0.0 | 95 |
| sseC | AAC28881.1 | SseC | Virulence | SPI-2 | Protein | 0.0 | 95 |
| sseC | NP_456128.1 | putative pathogenicity island effector protein | Virulence | SPI-2 | Protein | 0.0 | 94 |
| sseC | NP_805071.1 | pathogenicity island effector protein | Virulence | SPI-2 | Protein | 0.0 | 94 |
| sseC | YP_216408.1 | secretion system effector protein SseC | Virulence | SPI-2 | Protein | 0.0 | 93 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CFSAN002050_13395 | YP_008260590.1 | pathogenicity island 2 effector protein SseC | VFG0501 | Protein | 0.0 | 95 |
