Gene Information

Name : CFSAN002050_13390 (CFSAN002050_13390)
Accession : YP_008260589.1
Strain : Salmonella enterica CFSAN002050
Genome accession: NC_021818
Putative virulence/resistance : Virulence
Product : pathogenicity island 2 chaperone protein SscA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2445747 - 2446220 bp
Length : 474 bp
Strand : +
Note : may be involved in the translocation of effector proteins into the host cell; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGAAAAAAGACCCGACCCTACAACAGGCTCATGACACGATGCGATTTTTCCGGCGTGGCGGCTCGCTGCGTATGTTGTT
GGATGACGATGTTACACAGCCGCTTAATACTCTGTATCGCTATGCCATGCAGCTTATGGAGGTAAAAGAGTTCGCCGGCG
CAGCGCGACTTTTTCAATTGCTGACGATATATGATGCCTGGTCATTTGACTACTGGTTTCGGTTAGGGGAATGCTGCCAG
GCTCAAAAACATTGGGGGGAAGCGATATACGCTTATGGACGCGCGGCACAAATTAAGATTGATGCGCCGCAGGCGCCATG
GGCCGCAGCGGAATGCTACCTCGCGTGTGATAACGTTTGTTATGCAATAAAAGCGTTAAAGGCCGTGGTGCGTATTTGCG
GCGAGGTCAGTGAACATCAAATCCTCCGATTGCGTGCAGAAAAGATGTTACAGCAACTTTCTGACAGGAGCTAA

Protein sequence :
MKKDPTLQQAHDTMRFFRRGGSLRMLLDDDVTQPLNTLYRYAMQLMEVKEFAGAARLFQLLTIYDAWSFDYWFRLGECCQ
AQKHWGEAIYAYGRAAQIKIDAPQAPWAAAECYLACDNVCYAIKALKAVVRICGEVSEHQILRLRAEKMLQQLSDRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sscA NP_460364.1 secretion system chaperone Virulence SPI-2 Protein 3e-69 99
SC1420 YP_216407.1 secretion system chaperone protein SscA Virulence SPI-2 Protein 8e-70 99
sscA NP_456129.1 putative Type III secretion system chaperone protein Virulence SPI-2 Protein 4e-70 99
sscA NP_805070.1 type III secretion system chaperone protein Virulence SPI-2 Protein 4e-70 99
sscA AAC28880.1 putative secretion chaperone Virulence SPI-2 Protein 2e-69 99
sscA CAA12186.1 SscA Virulence SPI-2 Protein 2e-69 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002050_13390 YP_008260589.1 pathogenicity island 2 chaperone protein SscA VFG0500 Protein 1e-69 99