Gene Information

Name : CFSAN002050_13385 (CFSAN002050_13385)
Accession : YP_008260588.1
Strain : Salmonella enterica CFSAN002050
Genome accession: NC_021818
Putative virulence/resistance : Virulence
Product : pathogenicity island 2 effector protein SseB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2445160 - 2445750 bp
Length : 591 bp
Strand : +
Note : necessary for the correct localization of SseC and SseD on the bacterial cell surface; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGTCTTCAGGAAACATCTTATGGGGAAATCAAAACCCTATTGTGTTTAAAAATAGCTTCGGCGTCAGTAACACTGATAC
CGGGGGGCAGGATGACTTATCCCAGCAAAATCCGTTTGCCGAAGGGTATGGTGTTTTGCTTATTCTCCTTATGGTTATTC
AGGCTATCGCAAACGATAAATTTATTGAAGTCCAGCAGAACGCTGAACGTGCCAGAAATACCCAGGAAAAGTCAAATGAG
ATGGATGAGGTGATTGCTAAAGCAGCCAAGGGAGATGCTAAAACCAAAGAGGAGGTGCCTGAGGACGTAATTATATACAT
GCGTGAACACGGTATTCTCATCGATGGTCTGACCATTGATGAATATATGGCTAAATATGGCGATCATGGGAAGCTGGATA
AAGGTGGCCTACAGGCGATCAAAGCGGCTTTGGATAATGACGCCAACCGGAATACCGATCTTATGAGTCAGGGGCAGATA
ATAATTCAAAAAATGTCTCAGGAGCTTAACGCTGTCCTTACCCAACTGACGGGGCTTATCAGCAAGTGGGGGGAAATTTC
CAGTATGATAGCGCAGAAAACGTACTCATGA

Protein sequence : 
MSSGNILWGNQNPIVFKNSFGVSNTDTGGQDDLSQQNPFAEGYGVLLILLMVIQAIANDKFIEVQQNAERARNTQEKSNE
MDEVIAKAAKGDAKTKEEVPEDVIIYMREHGILIDGLTIDEYMAKYGDHGKLDKGGLQAIKAALDNDANRNTDLMSQGQI
IIQKMSQELNAVLTQLTGLISKWGEISSMIAQKTYS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sseB YP_216406.1 secretion system effector protein SseB Virulence SPI-2 Protein 2e-84 96
sseB NP_456130.1 putative pathogenicity island effector effector protein Virulence SPI-2 Protein 9e-84 95
sseB NP_805069.1 pathogenicity island effector protein Virulence SPI-2 Protein 9e-84 95
sseB NP_460363.1 translocation machinery component Virulence SPI-2 Protein 9e-84 95
sseB AAC28879.1 putative secreted protein Virulence SPI-2 Protein 6e-84 95
sseB CAA12185.1 SseB Virulence SPI-2 Protein 6e-84 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002050_13385 YP_008260588.1 pathogenicity island 2 effector protein SseB VFG0499 Protein 3e-84 95