Gene Information

Name : CFSAN002050_13350 (CFSAN002050_13350)
Accession : YP_008260581.1
Strain : Salmonella enterica CFSAN002050
Genome accession: NC_021818
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2437394 - 2438032 bp
Length : 639 bp
Strand : -
Note : is phosphorylated by SsrA; is involved in the expression of the virulence genes of Salmonella pathogenicity island-2; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGAAAGAATATAAGATCTTATTAGTAGACGATCATGAAATCATCATTAACGGCATTATGAATGCCTTATTACCCTGGCC
TCATTTTAAAATTGTAGAGCATGTTAAAAATGGTCTTGAGGTTTATAATGCCTGTTGCGCATACGAGCCTGACATACTTA
TCCTTGATCTTAGCTTACCTGGCATCAATGGCCTGGATATCATTCCTCAATTACATCAGCGTTGGCCAGCAATGAATATT
CTGGTTTACACGGCATACCAACAAGAGTATATGACCATTAAAACTTTAGCCGCAGGTGCTAATGGCTATGTTTTAAAAAG
CAGTAGTCAGCAAGTTCTGTTAGCGGCATTGCAAACAGTCGCAGTAAACAAGCGTTACATTGACCCGACGTTGAATCGGG
AAGCTATCCTGGCTGAATTAAAGGCTGACACGACCAATCATCAACTGCTTACTTTGCGCGAGCGTCAGGTTCTTAAACTT
ATTGACGAGGGGTATACCAATCATGGGATCAGCGAAAAACTACATATCAGTATAAAAACCGTCGAAACACATCGGATGAA
TATGATGAGAAAGCTACAGGTTCATAAAGTGACAGAGTTACTTAACTGCGCCCGAAGAATGAGGTTAATAGAGTATTAA

Protein sequence :
MKEYKILLVDDHEIIINGIMNALLPWPHFKIVEHVKNGLEVYNACCAYEPDILILDLSLPGINGLDIIPQLHQRWPAMNI
LVYTAYQQEYMTIKTLAAGANGYVLKSSSQQVLLAALQTVAVNKRYIDPTLNREAILAELKADTTNHQLLTLRERQVLKL
IDEGYTNHGISEKLHISIKTVETHRMNMMRKLQVHKVTELLNCARRMRLIEY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssrB YP_216399.1 secretion system transcriptonal activator Virulence SPI-2 Protein 2e-97 100
ssrB NP_460356.1 transcriptional activator Virulence SPI-2 Protein 5e-97 99
ssrB CAB09344.1 SsrB Virulence SPI-2 Protein 4e-88 99
ssrB NP_456137.1 putative two-component response regulator Virulence SPI-2 Protein 5e-97 99
ssrB NP_805062.1 two-component response regulator Virulence SPI-2 Protein 5e-97 99
YPO0255 YP_002345335.1 two-component response regulator Not tested Not named Protein 8e-48 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002050_13350 YP_008260581.1 transcriptional regulator VFG0492 Protein 2e-97 99