Gene Information

Name : CFSAN002050_13340 (CFSAN002050_13340)
Accession : YP_008260579.1
Strain : Salmonella enterica CFSAN002050
Genome accession: NC_021818
Putative virulence/resistance : Virulence
Product : membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2435356 - 2436315 bp
Length : 960 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGAATAACAAACCCGTAGTCGGCATTAGCGGATGTCTGACTGGCGCCGCGGTACGCTTTGATGGCGGACATAAGCGTAT
GGATTTTGTCATGAACTCTCTGGCGCCGTGGGTGGACTACAAACCGATCTGCCCGGAGGTGGCGATCGGCCTGCCCGTGC
CCCGCCCTGCGCTGCGTCTTATCCAGACGACCTGTGGCGACATTCGGATGCGCTATAGCCATGCCCCGCACGATGACGTC
ACCGAGCGAATGAATGCCTTTGCCGCTCGGTTTCTGCCAACAATAGGAGAACTGGCGGGGTTTATTGTGTGTGCAAAATC
GCCCAGTTGCGGAATGGAGCGCGTTCGCCTGTATGATGAAAAGGGTAACAGGGGCCGCAAAGCTGGCACGGGGCTGTTTA
CCGCCGCGATGATGGACAAATATCCCTGGCTGCCGATAGAGGAAGATGGTCGCCTGCACGATCCGGTACTACGCGAAAAT
TTCATCGCACGTATTTTCGCGCTACATGAATTAAATGCGCTACGCGCGCAGGGCTTGAGTCGTCACAGTTTGCTCGCGTT
TCATAGCCGATACAAACTTCAGCTTCTCGCCCACCACCAGGCCGGCTACCGCGAAATTGGCCCTTTCGTCGCGCGTCTGC
ATGAGTGGGACGATCTGGATGCCTTCTTTGTCCGATACAGAGAAAAACTGATGGCTATCCTGCGACACCCCGCTTCACGT
AAAAATCACACCAATGTGCTGATGCATATCCAGGGCTATTTTCACCGCGCGTTGAACAGCAGGCAACGCGCGGAATTACG
CGAGGTGATTCTCGGCTACCGGGCGGGCCGACTACCTATCCTGGCACCGTTAACGCTGCTGAAGCACTATCTGGCGGAAC
ATCCGGATGACTATCTACGCAGCCAGAATTATTTTGAGCCGTACCCTGATACATTAGGGCTGCGCTTAGCCATCACCTGA

Protein sequence :
MNNKPVVGISGCLTGAAVRFDGGHKRMDFVMNSLAPWVDYKPICPEVAIGLPVPRPALRLIQTTCGDIRMRYSHAPHDDV
TERMNAFAARFLPTIGELAGFIVCAKSPSCGMERVRLYDEKGNRGRKAGTGLFTAAMMDKYPWLPIEEDGRLHDPVLREN
FIARIFALHELNALRAQGLSRHSLLAFHSRYKLQLLAHHQAGYREIGPFVARLHEWDDLDAFFVRYREKLMAILRHPASR
KNHTNVLMHIQGYFHRALNSRQRAELREVILGYRAGRLPILAPLTLLKHYLAEHPDDYLRSQNYFEPYPDTLGLRLAIT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 2e-152 99
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 2e-152 99
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 3e-152 99
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 3e-152 99
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 3e-152 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002050_13340 YP_008260579.1 membrane protein VFG0490 Protein 1e-152 99