Gene Information

Name : CFSAN002050_13330 (CFSAN002050_13330)
Accession : YP_008260577.1
Strain : Salmonella enterica CFSAN002050
Genome accession: NC_021818
Putative virulence/resistance : Virulence
Product : Tetrathionate response regulatory protein TtrR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2434330 - 2434950 bp
Length : 621 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
ATGGCGACAATTCATCTACTGGATGATGATACGGCGGTCACTAACGCGTGCGCGTTTTTACTGGAAAGTCTGGGATATGA
CGTAAAATGCTGGACGCAGGGGGCGGATTTTTTGGCGCAGGCCAGTCTGTATCAGGCCGGAGTCGTATTACTGGATATGC
GAATGCCGGTACTGGATGGGCAGGGCGTTCATGATGCGTTGCGCCAGTGCGGAAGTACCCTGGCGGTTGTTTTTCTTACC
GGGCATGGCGATGTACCGATGGCCGTGGAGCAGATGAAACGCGGCGCCGTCGATTTTCTGCAAAAACCGGTATCGGTAAA
ACCGCTACAGGCGGCGCTGGAGCGTGCGCTGACGGTTTCATCGGCAGCGGTGGCGCGCCGTGAGATTATACTGTGTTACC
AGCAGTTGACGCCGAAAGAGCGTGAGCTGGCCAGCCTGGTGGCAAAAGGATTTATGAACCGTGAAATTGCGGAAGCGATG
AATATCGCGGTGCGCACCGTAGAGGTGCACCGCGCCAGAGTCATGGAAAAAATGCAGGCCGGTAGCCTGGCGGAACTGAT
TAGGCGTTTCGAAAAAATGGCCTCGCCAGAGACCAGAATACGAACAACGTATGAGCCATGA

Protein sequence : 
MATIHLLDDDTAVTNACAFLLESLGYDVKCWTQGADFLAQASLYQAGVVLLDMRMPVLDGQGVHDALRQCGSTLAVVFLT
GHGDVPMAVEQMKRGAVDFLQKPVSVKPLQAALERALTVSSAAVARREIILCYQQLTPKERELASLVAKGFMNREIAEAM
NIAVRTVEVHRARVMEKMQAGSLAELIRRFEKMASPETRIRTTYEP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 8e-95 100
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 1e-94 100
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 1e-94 100
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 1e-94 100
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 8e-95 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002050_13330 YP_008260577.1 Tetrathionate response regulatory protein TtrR VFG0488 Protein 2e-95 100