|
Name : CFSAN002050_11840 (CFSAN002050_11840) Accession : YP_008260283.1 Strain : Salmonella enterica CFSAN002050 Genome accession: NC_021818 Putative virulence/resistance : Virulence Product : effector protein PipB Function : - COG functional category : - COG ID : - EC number : - Position : 2143862 - 2144737 bp Length : 876 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: Protein Homology. DNA sequence : ATGCCAATAACTAACGCGTCCCCAGAAAATATATTAAGATATTTGCATGCGGCCGGTACCGGTACGAAAGAAGCAATGAA AAGTGCAACTTCACCACGCGGTATACTGGAGTGGCTTGTCAATTTTTTTACCTGTGGTGGAGTAAGAAGAAGCAATGAAA GATGCTTTCGGGAGGTAATTGGCAAACTGACCACATCATTATTATATGTAAATAAAGATGCTTTCTTCGATGGTAATAAA ATATTTCTGGAGGATGTCAACGGGTGTACTATATGTCTGTCATGTGGAGCAGCATCCGAAAATACGGATCCCATGGTCAT TATTGAAGTGAACAAAAATGGAAAAACTGTAACGGATAAAGTTGATAGCGAGAGATTTTGGAATGTATGTCGAATGTTAA AGCTGATGAGTAAACATAATATACAACAGCCTGATTCACTTATAACCGAGGATGGTTTTCTGAACCTGCGCGGAGTAAAC CTGGCTCATAAAGATTTCCAGGGGGAAGATTTGTCAGAAATAGATGCTTCTGATGCAGATTTCCGTGAAACAAATCTTTC TAATGTAAATTTAGTTGGTGCAATTTTGTGTTGTGCAAATCTACACGCTGTAAATCTAATGGGTTCAAACATGACTAAAG CAAACCTGACTCACGCAGACCTGACTTGCGCTAACATGTCCGGTGTAAACTTAACCGCTGCAATTCTATTCGGCTCAGAC TTAACTGACACCAAATTAAATGGTGCAAAATTAGATAAGATAGCTCTAACTTTAGCGAAAGCATTAACAGGAGCCGATCT GACAGGTAGTCAACATACCCCTACTCCACTCCCGGATTACAATGATAGAACTCTTTTCCCCCATCCGATATTTTAG Protein sequence : MPITNASPENILRYLHAAGTGTKEAMKSATSPRGILEWLVNFFTCGGVRRSNERCFREVIGKLTTSLLYVNKDAFFDGNK IFLEDVNGCTICLSCGAASENTDPMVIIEVNKNGKTVTDKVDSERFWNVCRMLKLMSKHNIQQPDSLITEDGFLNLRGVN LAHKDFQGEDLSEIDASDADFRETNLSNVNLVGAILCCANLHAVNLMGSNMTKANLTHADLTCANMSGVNLTAAILFGSD LTDTKLNGAKLDKIALTLAKALTGADLTGSQHTPTPLPDYNDRTLFPHPIF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pipB | NP_455586.1 | conserved hypothetical protein | Virulence | SPI-5 | Protein | 4e-130 | 98 |
| pipB | AAC33725.1 | PipB | Virulence | SPI-5 | Protein | 5e-130 | 98 |
| pipB | NP_460061.1 | secreted effector protein | Virulence | SPI-5 | Protein | 7e-129 | 98 |
| pipB | YP_216027.1 | pathogenicity island encoded protein: SPI3 | Virulence | SPI-5 | Protein | 1e-129 | 98 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CFSAN002050_11840 | YP_008260283.1 | effector protein PipB | VFG0589 | Protein | 3e-129 | 98 |
