Gene Information

Name : CFSAN002050_11655 (CFSAN002050_11655)
Accession : YP_008260247.1
Strain : Salmonella enterica CFSAN002050
Genome accession: NC_021818
Putative virulence/resistance : Virulence
Product : AlpA family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2108911 - 2109087 bp
Length : 177 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGGATCTGAAAGAAGTTTGTAAAGCTGTTGGATTCAAAAAGGTATCCATTTACAGTTGGATGAACGCGGGTGAATTCCC
AAAATCCATTAAAATAGGTAGATCCGTAAGGTGGTTGTCAACGGAAGTGGAAGAATGGATAGCCGAAAAGATTCGTGCAG
CGAGACAGGAAAAATAG

Protein sequence :
MDLKEVCKAVGFKKVSIYSWMNAGEFPKSIKIGRSVRWLSTEVEEWIAEKIRAARQEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 1e-07 47
unnamed CAA21398.1 - Not tested HPI Protein 2e-07 47
PMI2608 YP_002152324.1 prophage regulatory protein Not tested Not named Protein 5e-06 46
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 1e-05 41
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 1e-05 41
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 1e-05 41
ORF C109 AAN62202.1 phage-related protein Not tested PAGI-2(C) Protein 2e-06 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002050_11655 YP_008260247.1 AlpA family transcriptional regulator VFG1118 Protein 4e-06 41