|
Name : CFSAN002050_11645 (CFSAN002050_11645) Accession : YP_008260245.1 Strain : Salmonella enterica CFSAN002050 Genome accession: NC_021818 Putative virulence/resistance : Virulence Product : type III secretion protein SopE Function : - COG functional category : - COG ID : - EC number : - Position : 2107633 - 2108370 bp Length : 738 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : GTGACAAAAATAACTTTATTTCCCCATAACTTTAGAATCCAAAAACAGGAAACCACACCACTAAAAGAAAAATCAACCGA GAAAAATTCTTTAGCAAAAAGTATTCTCGCAGTAAAAAATCACTTCATCAAATTAAATTCAAAATTATCGGAACGTTTTA TTTCGCATAAGAACACTGAATCTTCTGCAACACACTTTCACCGAGGAAGCGCATCTGAGGGCCGGGCAGTGTTGACAAAT AAAGTCGTTAAAAACTTTATGCTTCAAACGCTCCATGATATAGATATTCGAGGTAGCGCGAGTAAAGACCCCGCATACGC CAGCCAGACCCGTGAAGCTATACTATCGGCAGTTTACAGCAAGTATAAAGATCAGTATTGTAACTTGCTCATCAGCAAAG GAATCGTCAGCAAAGGAATCGACATGGCGCCTTTTCTTAAGGAAATTGGCGAGGCTGCGCAAAATGCAGGTCTGCCCGGA GCAACCAAGAATGACATTTTTACACCAAGCGGCGCAGGAGCCAATCCTTTTATAACTCCGTTGATTACATCAGCATACAA TAAGTATCCACATATGTTTACCAGTCAACATCAGAAGGCATCCTTTAACATCTATGCGGAGAAGATCATTATGAAAGAAG TTGCACCGCTGTTTAATGAGTGTGCTATGCCGACTCCACAGCAATTCCAACTGATACTAGAAAACATTGCTAATAAATAT ATCCAAAACACTCCCTGA Protein sequence : MTKITLFPHNFRIQKQETTPLKEKSTEKNSLAKSILAVKNHFIKLNSKLSERFISHKNTESSATHFHRGSASEGRAVLTN KVVKNFMLQTLHDIDIRGSASKDPAYASQTREAILSAVYSKYKDQYCNLLISKGIVSKGIDMAPFLKEIGEAAQNAGLPG ATKNDIFTPSGAGANPFITPLITSAYNKYPHMFTSQHQKASFNIYAEKIIMKEVAPLFNECAMPTPQQFQLILENIANKY IQNTP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sopE | NP_807899.1 | invasion-associated secreted protein | Virulence | SPI-7 | Protein | 9e-97 | 88 |
| sopE | NP_458691.1 | invasion-associated secreted protein. | Virulence | SPI-7 | Protein | 9e-97 | 88 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CFSAN002050_11645 | YP_008260245.1 | type III secretion protein SopE | VFG0467 | Protein | 9e-79 | 65 |
