Gene Information

Name : CFSAN002050_09630 (CFSAN002050_09630)
Accession : YP_008259857.1
Strain : Salmonella enterica CFSAN002050
Genome accession: NC_021818
Putative virulence/resistance : Virulence
Product : immunoglobulin-binding regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1692641 - 1693171 bp
Length : 531 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGGCGATACATAGCGTTAGTCCTTTTCGCGATGAGCCTGTCGATTGTGTCCTGTGGGTGAAAAACGATCATATTTCGCC
TAATGACTACAACCCGAATAACGTTGCGCCGCCGGAGAAAAAACTGCTGCTTAAATCGATTGAACAAGATGGGTTTACTC
AGCCGATCGTGGTGGTAAAGGCCGATGCCGAGGAGTACGAGATTGTGGACGGTTTTCACCGTCATGAGCTGGGCAAAGGA
AAAGCGGCCCTGAAAAGGCGTCTGAAAGGCTACCTGCCGATAACGTGTCTGGACAGAGAACGTCACGAACGCATGGCGGC
AACCATTCGGCATAACCGCGCGCGCGGGCGTCACCAGATCCACGCCATGTCAGAAATCGTGCGCGAACTTTCTCTGCTAG
GCTGGGACGAGAGCAAAATCGGCCAGGAGTTAGGTATGGACGCCGATGAAGTCCTGCGCCTGAAACAGATCAACGGCCTG
CAGGAGCTTTTTGCAGACCGTCGATTCTCCAGAGCGTGGACGGTTAAATAA

Protein sequence :
MAIHSVSPFRDEPVDCVLWVKNDHISPNDYNPNNVAPPEKKLLLKSIEQDGFTQPIVVVKADAEEYEIVDGFHRHELGKG
KAALKRRLKGYLPITCLDRERHERMAATIRHNRARGRHQIHAMSEIVRELSLLGWDESKIGQELGMDADEVLRLKQINGL
QELFADRRFSRAWTVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
z1204 CAD33764.1 Z1204 protein Not tested PAI I 536 Protein 2e-52 63
ibrB ADD91736.1 predicted transcriptional regulator IbrB Not tested PAI-I AL862 Protein 2e-51 62
Z1204 NP_286739.1 hypothetical protein Not tested TAI Protein 7e-51 62
Z1644 NP_287147.1 hypothetical protein Not tested TAI Protein 7e-51 62
Z1644 AAQ19140.1 putative ParB-like nuclease Not tested PAI I CL3 Protein 2e-51 62
c5208 NP_757056.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-39 62
ORF_30 AAZ04440.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-39 62
APECO1_3503 YP_854305.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-39 62
STY4584 NP_458668.1 conserved hypothetical protein Not tested SPI-7 Protein 2e-49 59
t4278 NP_807876.2 hypothetical protein Not tested SPI-7 Protein 2e-49 59
M5005_Spy_0164 YP_281528.1 parB-like nuclease Not tested Not named Protein 1e-30 52
ef0120 AAM75321.1 EF0120 Not tested Not named Protein 2e-31 51
EF0607 NP_814365.1 ParB-like nuclease domain-containing protein Not tested Not named Protein 4e-31 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002050_09630 YP_008259857.1 immunoglobulin-binding regulator VFG1505 Protein 9e-53 63