Gene Information

Name : CFSAN002050_09335 (CFSAN002050_09335)
Accession : YP_008259799.1
Strain : Salmonella enterica CFSAN002050
Genome accession: NC_021818
Putative virulence/resistance : Virulence
Product : fimbrial chaperone protein FimC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1630485 - 1631198 bp
Length : 714 bp
Strand : +
Note : involved in type 1 fimbriae biosynthesis, interacts with FimH; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGCAAAAGGTATTTTTTACCATGCTGAATAGTATAAAAGTAGGCTTTATTGTTCTTCTCACGTTATTTACTTCGTTGAA
CGTACAGGCGGCGGGGGGGATTGCATTAGGCGCCACGCGCGTTATTTATCCCTCGGCGGCGAAACAGACTTCTCTGGCAA
TCAGTAATAGCGATATTCAAGAACGTTACCTCGTCAATTCATGGATCGAAAATAGCGCCGGGCAGAAAGAAAAAACGTTT
ATCGTTACGCCGCCTTTATTCGTCAGCGAACCCAAAAGCGAAAACACGCTGCGTATTATCTACGCCGGGCAACCGCTACC
CGGGGATCGGGAGTCGTTATTCTGGATGAACGTGAAAGCCATCCCGTCGGTCGATAAAAGTCATATTGAAGGAAAAAACG
TTCTGCAACTGGCGATTCTGTCGCGCATCAAACTGTTCGTGCGTCCGGCGAATTTGCCACAGACGCCGGAAGACGCGCCG
ACCTTGCTGAAATTTTCCCGTGTCGGCAACCATCTCAAGATAACCAACCCATCTGCTTATTACCTCACGCTGGTCAATAT
CAGCGTGGGCGCGAAAAAGATTGATAACGTGATGATCGCGCCAAAAAGCGACATGCAAATTCCCTTACCGACTGGCGCGC
AGGGCAGCGTGACATTTCAGACCGTCAATGATTACGGCGCATTGACGTCGGCGACAACGGCCAGTCTCGGTTAA

Protein sequence : 
MQKVFFTMLNSIKVGFIVLLTLFTSLNVQAAGGIALGATRVIYPSAAKQTSLAISNSDIQERYLVNSWIENSAGQKEKTF
IVTPPLFVSEPKSENTLRIIYAGQPLPGDRESLFWMNVKAIPSVDKSHIEGKNVLQLAILSRIKLFVRPANLPQTPEDAP
TLLKFSRVGNHLKITNPSAYYLTLVNISVGAKKIDNVMIAPKSDMQIPLPTGAQGSVTFQTVNDYGALTSATTASLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 1e-51 50
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 8e-48 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002050_09335 YP_008259799.1 fimbrial chaperone protein FimC VFG0445 Protein 2e-103 99
CFSAN002050_09335 YP_008259799.1 fimbrial chaperone protein FimC VFG0911 Protein 4e-48 50
CFSAN002050_09335 YP_008259799.1 fimbrial chaperone protein FimC VFG1644 Protein 5e-48 50
CFSAN002050_09335 YP_008259799.1 fimbrial chaperone protein FimC VFG0875 Protein 6e-53 47
CFSAN002050_09335 YP_008259799.1 fimbrial chaperone protein FimC VFG0455 Protein 3e-40 42