Gene Information

Name : CFSAN002050_08100 (CFSAN002050_08100)
Accession : YP_008259555.1
Strain : Salmonella enterica CFSAN002050
Genome accession: NC_021818
Putative virulence/resistance : Virulence
Product : pili assembly chaperone protein SafB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1367882 - 1368595 bp
Length : 714 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGGCGGTAGCTTTGTTCGCCACTAATTCTATGGTTTCAGTATATGCCGCCAGGCAGCAATTAAATTCAGCCACTAAATT
ATTCAGCGTGAAGCTGGGGGCTACACGAGTGATTTATCACGCTGGTACGCCCGGCGCGACGCTCTCGGTGAGCAACCCGC
AGAATTACCCTATTTTGGTTCAGTCTTCAGTCAAAGCAGCAGACAAAAGTTCGCCTGCTCCCTTTTTGGTGATGCCGCCT
CTATTTCGTTTAGAAGCGAACCAGCAGAGTCAACTGCGTATTGTCCGTACTGGTGGTGACATGCCAACGGATCGTGAGAC
TTTACAGTGGGTCTGTATAAAGGCGGTACCACCCGAAAATGAACCGTCGGATACACAGGCTAAGGGCGCGACCCTTGACC
TCAATTTGTCCATCAACGCCTGTGATAAGCTGATTTTCCGCCCGGATGCCGTGAAGGGGACGCCGGAAGATGTTGCAGGA
AATTTAAGATGGGTGGAGACGGGCAACAAACTTAAGGTGGAGAACCCCACCCCGTTTTACATGAATTTAGCCTCTGTCAC
AGTAGGGGGAAAGCCCATTACAGGGCTTGAGTATGTCCCCCCCTTTGCTGACAAAACACTAAATATGCCAGGTAGTGCCC
ATGGTGATATTGAGTGGAGAGTTATTACAGACTTTGGTGGTGAAAGTCATCCGTTCCACTACGTTCTTAAATAA

Protein sequence : 
MAVALFATNSMVSVYAARQQLNSATKLFSVKLGATRVIYHAGTPGATLSVSNPQNYPILVQSSVKAADKSSPAPFLVMPP
LFRLEANQQSQLRIVRTGGDMPTDRETLQWVCIKAVPPENEPSDTQAKGATLDLNLSINACDKLIFRPDAVKGTPEDVAG
NLRWVETGNKLKVENPTPFYMNLASVTVGGKPITGLEYVPPFADKTLNMPGSAHGDIEWRVITDFGGESHPFHYVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
safB NP_454906.1 periplasmic fimbrial chaperone protein Not tested SPI-6 Protein 9e-102 92
afaB AAK16197.1 AfaB Virulence PAI-I AL862 Protein 5e-55 49
afaB ADD91742.1 putative AfaB-VIII periplasmic chaperone Not tested PAI-I AL862 Protein 5e-55 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN002050_08100 YP_008259555.1 pili assembly chaperone protein SafB VFG0943 Protein 2e-52 49
CFSAN002050_08100 YP_008259555.1 pili assembly chaperone protein SafB VFG0850 Protein 4e-56 48
CFSAN002050_08100 YP_008259555.1 pili assembly chaperone protein SafB VFG0858 Protein 1e-52 48
CFSAN002050_08100 YP_008259555.1 pili assembly chaperone protein SafB VFG0852 Protein 3e-54 47