|
Name : araD (CFSAN002050_06950) Accession : YP_008259333.1 Strain : Salmonella enterica CFSAN002050 Genome accession: NC_021818 Putative virulence/resistance : Unknown Product : L-ribulose-5-phosphate 4-epimerase Function : - COG functional category : - COG ID : - EC number : 5.1.3.4 Position : 1112128 - 1112823 bp Length : 696 bp Strand : - Note : catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source DNA sequence : ATGTTAGAAGATCTCAAACGCCAGGTACTGGAAGCCAATCTGGCGCTGCCAAAACACAACCTGGTCACCCTTACCTGGGG TAACGTCAGCGCCGTCGATCGCGAACGCGGCGTACTGGTGATTAAGCCGTCCGGCGTCGATTATAGCGTCATGACCGCTG ACGATATGGTGGTGGTCAGCCTGGAGAGCGGTGAAGTCGTTGAAGGTCATAAGAAACCGTCGTCCGATACGCCAACCCAC CGTCTGTTGTACCAGGCATTTCCGACTATCGGCGGCATCGTACACACCCATTCGCGCCACGCGACTATCTGGGCGCAGGC GGGTCAGCCGATTCCGGCGACGGGAACCACCCATGCCGACTATTTCTACGGTACGATTCCCTGCACTCGCAAAATGACCG AGGCGGAAATTAATGGCGAGTATGAATGGGAAACGGGCAATGTCATTGTTGAAGCCTTTGAAAAACAAGGTATTGACGCC GCTCAAATGCCCGGCGTGCTTGTCCATTCGCACGGCCCGTTTGCCTGGGGTAAAAATGCCGAGGATGCCGTGCATAACGC CATCGTGCTGGAAGAAGTGGCCTATATGGGGATCTTCTGCCGCCAGCTTGCGCCGCAGTTGCCCGACATGCAGCAATCCC TGCTGGATAAACACTATCTACGCAAACATGGCGCAAAAGCCTATTACGGGCAGTAA Protein sequence : MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDRERGVLVIKPSGVDYSVMTADDMVVVSLESGEVVEGHKKPSSDTPTH RLLYQAFPTIGGIVHTHSRHATIWAQAGQPIPATGTTHADYFYGTIPCTRKMTEAEINGEYEWETGNVIVEAFEKQGIDA AQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEVAYMGIFCRQLAPQLPDMQQSLLDKHYLRKHGAKAYYGQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| araD | YP_281517.1 | L-ribulose-5-phosphate 4-epimerase | Not tested | Not named | Protein | 2e-55 | 56 |
