Gene Information

Name : SEEB0189_00395 (SEEB0189_00395)
Accession : YP_008258297.1
Strain :
Genome accession: NC_021817
Putative virulence/resistance : Unknown
Product : transposase IS66
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 76212 - 76556 bp
Length : 345 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
TTGCATGACTGGTTGGTGGGGAAAAGCGCCACTCTGTCGAAAAAATCCCGGTTGAGCGTGGCGTTCTCTTATGCCCTGAA
CCAGTGGGATGCCCTGTACTACTGCGATAACGGTCTTGCAGAAACTGATAACAATGCCGCAGAACGTGCGCTACAAGCCG
TCTGTCTTGACAAGAAAAATTATATCTTCTTCGGGAGCGATCACGGAGGTGAGCGTGGTGCACTGCTGTACGGTCTGATT
GGTACGTGCAGTCTCAATGGCATTGACCCAGAGGCTTATCTTCGCCATATCCTAAGCGTACTGCTGGAGTGGCCTTCCAA
TAAAGTGGCTGAGCTACTGCCCTAG

Protein sequence :
MHDWLVGKSATLSKKSRLSVAFSYALNQWDALYYCDNGLAETDNNAAERALQAVCLDKKNYIFFGSDHGGERGALLYGLI
GTCSLNGIDPEAYLRHILSVLLEWPSNKVAELLP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42054.1 hypothetical protein Not tested PAI II 536 Protein 1e-28 67
unnamed AAK00461.1 unknown Not tested SHI-1 Protein 4e-30 66
SF2970 NP_708744.1 hypothetical protein Not tested SHI-1 Protein 5e-30 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SEEB0189_00395 YP_008258297.1 transposase IS66 VFG1573 Protein 5e-29 67
SEEB0189_00395 YP_008258297.1 transposase IS66 VFG0632 Protein 1e-30 66